Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq9972 93.3 4e-14
seq12144 84.2 2e-11
>seq9972
Length=29549
Score = 93.3 bits (102), Expect = 4e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665
|| ||||| |||||||||||||| ||||||||| | |||||| |||| | |||||||
Sbjct 11842 GAGACCGGCACGCCGTACATGCTGTACAAAGACTCTTGCAACCGGAAGAGCAATCAGCAG 11901
Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706
|||||||| || || ||||| || ||||| || | |||||
Sbjct 11902 AACTTGGGGACCATCAAATGCAGCAATCTGTGTACAGAAAT 11942
>seq12144
Length=38566
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187
|| ||| ||||| || || |||||||| ||||| || || ||| | ||| |||
Sbjct 439 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 380
Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247
|||| || || || || | |||| | ||||| || || ||||||||||| || ||
Sbjct 379 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 320
Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307
|| || ||| || | || | |||||| | |||||| ||||| || | ||
Sbjct 319 CTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 260
Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|||||||| || || |||||||| || ||||||
Sbjct 259 CTTGCCGGTCAGGGTCTTTACAAAGATCTGCATC 226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450498232745440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |