Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq21304 165 9e-36 seq12144 131 2e-25 seq109229 122 1e-22 seq189893 100 3e-16 >seq21304 Length=31350 Score = 165 bits (182), Expect = 9e-36 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||||||||||| || |||||| ||||| |||||||||| Sbjct 126 TGCCACCCCTCAGGCGCAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 185 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || |||||| |||| || ||||||||||| || || |||| | |||||| || | || Sbjct 186 AAAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGCG 245 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||||| || | | ||||| || | || | Sbjct 246 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 305 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||||||||| || || |||||||| ||||| Sbjct 306 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 354 Score = 152 bits (168), Expect = 6e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||||||||||| || |||||| ||||| |||||||| | Sbjct 354 TGCCACCCCTCAGGCGCAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 413 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || |||||| | || || ||||||||||| || || |||| | |||||| || | | Sbjct 414 ACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGG 473 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||||| || | | ||||| || | || | Sbjct 474 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 533 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 | |||| |||||||| ||||||||||| || || |||||||| |||||||| Sbjct 534 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 585 Score = 82.4 bits (90), Expect = 9e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 46471 CTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGT 46530 |||||| || | ||| | || |||||||||| |||||| ||||| || | | || Sbjct 4 CTGCTGATCAGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGT 63 Query 46531 GTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTG 46590 ||| || | || || |||| |||||||| ||||||||||| || || |||||||| || Sbjct 64 GTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTG 123 Query 46591 CAT 46593 ||| Sbjct 124 CAT 126 >seq12144 Length=38566 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| ||||| | || ||||| ||||| ||||||||||| || ||||| | Sbjct 441 CGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 382 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || |||||||||||||| || |||| | |||||| |||| || | || |||||| Sbjct 381 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 322 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | || | | ||||| || | || || || | |||||| Sbjct 321 TCCTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 262 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 || ||||| ||||| || || |||||||| ||||| ||| || Sbjct 261 GTCTTGCCGGTCAGGGTCTTTACAAAGATCTGCATCTTGAAC 220 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | |||| ||| ||||| | ||| ||||| ||||| ||||||||||| Sbjct 1366 GCCACCCCTCAGGCGCAGCACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 1307 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || ||||| | || || |||||||||||||| || |||| | |||||| |||| || Sbjct 1306 CAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGG 1247 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||||||||| |||||| ||| | || | | ||||| || | || || Sbjct 1246 AATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGAC 1187 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| || || ||||| || || |||||||| ||||| Sbjct 1186 CTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 1139 Score = 125 bits (138), Expect = 8e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||| ||||| | || ||||| ||||| |||||||| | Sbjct 911 TGCCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 852 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| ||||| |||| | |||||| |||| | Sbjct 851 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGG 792 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| ||||||| || | || | | ||||| || | || | Sbjct 791 GAATACCTTCCTTGTCCTGGATCTTCGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAA 732 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||||||||| ||||| || || |||||||| ||||| Sbjct 731 CCTCGAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 683 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | |||| ||| ||||| | || ||||| ||||| |||||||||| Sbjct 683 TGCCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGG 624 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| ||||| |||| | |||||| |||| | Sbjct 623 ACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGG 564 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||| | || | | ||||| || | || | Sbjct 563 GAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGA 504 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| || || |||| || || |||||||| ||||| Sbjct 503 CCTCAAGGGTGATGGTCTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 455 Score = 104 bits (114), Expect = 3e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| ||||| | || ||||| ||||| ||||| || || || || || | Sbjct 1125 CGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCTGAGAGGGTACGACCA 1066 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||| ||||| |||| | |||||| |||| || | || |||||| Sbjct 1065 TCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 1006 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | || | | ||||| || | || || || | |||||| Sbjct 1005 TCCTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 946 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||| ||||| Sbjct 945 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 911 >seq109229 Length=213 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46406 TTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 46465 || ||||| ||||||||||| || ||||| | || || ||||| ||||| ||||||||| Sbjct 213 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAATATC 154 Query 46466 AAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC 46525 | | ||||||||| | || | || |||||||| |||||| ||||| || | Sbjct 153 AGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCG 94 Query 46526 ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAG 46585 | ||||| || | || || || | |||||||| ||||||||||| || || || ||| Sbjct 93 ATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 34 Query 46586 ATTTGCATTTTG 46597 || ||||| ||| Sbjct 33 ATCTGCATGTTG 22 >seq189893 Length=523 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||||||| | || ||||||||| || |||||||| || | ||| || | || Sbjct 281 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 340 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || |||||||| || || || |||| | |||||| || | || | | ||||| || Sbjct 341 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 400 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 | |||||| ||| | | | | ||||| | ||| || || | ||||||||| Sbjct 401 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 460 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || |||||||| ||||| Sbjct 461 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563356410485280