Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq263127 123 1e-22
seq189893 96.9 1e-14
seq5191 91.5 6e-13
seq9782 87.8 7e-12
seq3277 86.0 2e-11
>seq263127
Length=2033
Score = 123 bits (136), Expect = 1e-22
Identities = 394/604 (65%), Gaps = 18/604 (3%)
Strand=Plus/Minus
Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGT--- 451952
|||| ||||| | || || |||||||| |||| || || ||||| | | ||
Sbjct 994 ATGATATTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAGAAACTTCTGCAAG 935
Query 451953 -CTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011
|||||| | |||||| | || |||||| | || || ||||||||||||||
Sbjct 934 ACTTCTTCAAT----GGAAAAGAGCTGAACAAGAGCATTAACCCCGATGAAGCTGTTGCC 879
Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGA 452068
|||||||| || || || ||||| |||||| | || ||| | ||| || |
Sbjct 878 TATGGTGCAGCTGTCCAGGCAGCCATTCTATCTGG---AGACAAGTCTGAGAACGTTCAG 822
Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128
||| | ||| | | ||||| || ||||| || ||||| ||||||| ||||| ||| |
Sbjct 821 GATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGCGGAGTC 762
Query 452129 ATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGT 452188
|||||| | || || || || | || || || ||| || || || |
Sbjct 761 ATGACTGTCCTCATCAAGCGCAATACCACCATCCCCACCAAGCAGACACAGACTTTCACC 702
Query 452189 ACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATG 452248
|| ||| ||||| || |||||| ||||| |||| |||||| ||| | || |||
Sbjct 701 ACCTACTCTGACAACCAGCCTGGTGTACTCATTCAGGTGTATGAAGGTGAAAGGGCCATG 642
Query 452249 ACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGG 452308
|| || || || || ||| | || || || ||| ||||| || |
Sbjct 641 ACCAAGGACAACAACCTGCTTGGAAAGTTCGAGCTCACAGGCATCCCTCCAGCACCCCGT 582
Query 452309 GGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGT 452368
|| ||||| ||||| |||| | ||| | ||||| ||||| || || ||||| |
Sbjct 581 GGGGTCCCTCAGATTGAGGTTACTTTTGACATCGATGCCAATGGCATCCTCAATGTTTCT 522
Query 452369 GCAGTTGA-AAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACC 452426
|| || || || | || | || ||| |||| || || || || || ||||| || ||
Sbjct 521 GCTGTAGATAAGAGCA-CAGG-AAAGGAGAACAAGATCACCATCACCAATGACAAGGGCC 464
Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATG 452486
| || ||| ||||||||||| ||||| | ||||| || || | ||||| ||| |
Sbjct 463 GCTTGAGTAAGGAAGATATTGAGCGCATGGTCCAAGAAGCTGAGAAGTACAAGGCTGAGG 404
Query 452487 ATGA 452490
||||
Sbjct 403 ATGA 400
>seq189893
Length=523
Score = 96.9 bits (106), Expect = 1e-14
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || || || || ||||| || || || || |||||| | ||
Sbjct 493 ATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 434
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || ||| | | || || || || ||||||||||||||||||||||||||
Sbjct 433 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 374
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || || | || || || || |||||||| | |||||| | || || ||
Sbjct 373 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 314
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | || || |||||
Sbjct 313 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACT 276
>seq5191
Length=291325
Score = 91.5 bits (100), Expect = 6e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| |||| || | ||||| || || ||||||||||| | || || || || ||
Sbjct 28333 GTTACTAATGCTGTCGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACG 28274
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| ||||| || | || || || |||||||| || || || |||||
Sbjct 28273 AAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAATTATCAACGAGCCGACAGCT 28214
Query 451433 GCTGCTCTAGCATATGGACT 451452
||||| |||| ||||| ||
Sbjct 28213 GCTGCCATAGCCTATGGTCT 28194
>seq9782
Length=92745
Score = 87.8 bits (96), Expect = 7e-12
Identities = 167/244 (68%), Gaps = 14/244 (6%)
Strand=Plus/Minus
Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTC 451953
|| || ||||| ||||| || ||||| || || || || || ||| | || | | |
Sbjct 38653 GAGATCGTGCTGGTAGGTGGCTCTACCCGTATCCCCAAGATCCAAAAGCTGCTACAGGAC 38594
Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013
||||| | || ||| | || |||||| | ||||||||||| |||||||| ||
Sbjct 38593 TTCTTCAAT----GGCAAAGAGCTCAACAAGAGCATCAATCCTGATGAGGCTGTTGCTTA 38538
Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070
|||||||| || ||||||||||| || | || ||| | ||| || | ||
Sbjct 38537 CGGTGCTGCTGTGCAAGCAGCTATCCTCATGGG---AGACAAGTCTGAGAACGTGCAGGA 38481
Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130
| | ||| | | ||||| || ||||| || || || | || ||||| |||||| ||||
Sbjct 38480 TCTGCTGCTGTTGGATGTCACCCCTCTGTCCCTGGGCATCGAGACAGCCGGTGGAGTGAT 38421
Query 452131 GACT 452134
||||
Sbjct 38420 GACT 38417
>seq3277
Length=206865
Score = 86.0 bits (94), Expect = 2e-11
Identities = 108/148 (73%), Gaps = 3/148 (2%)
Strand=Plus/Plus
Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208
||||||| | | || | ||||| | | || || | | |||| |||||| ||||||
Sbjct 51580 AAAAAGACAGTATATGTTGTTCTTCTCAGGTTGTTGAAAAGAAAGCCAAGCCCCATATTC 51639
Query 451209 AAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265
|||| || | ||||| | || ||||| |||||||||||||||||||| ||||||
Sbjct 51640 AAGTCGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCTGAAGAAATTTCTGCTATGG 51699
Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGA 451293
| || || || ||||| || || |||||
Sbjct 51700 TCCTGACAAAGATGAAGGAGACGGCAGA 51727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1968975690471312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |