Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq263127 123 1e-22 seq189893 96.9 1e-14 seq5191 91.5 6e-13 seq9782 87.8 7e-12 seq3277 86.0 2e-11 >seq263127 Length=2033 Score = 123 bits (136), Expect = 1e-22 Identities = 394/604 (65%), Gaps = 18/604 (3%) Strand=Plus/Minus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGT--- 451952 |||| ||||| | || || |||||||| |||| || || ||||| | | || Sbjct 994 ATGATATTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAGAAACTTCTGCAAG 935 Query 451953 -CTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 |||||| | |||||| | || |||||| | || || |||||||||||||| Sbjct 934 ACTTCTTCAAT----GGAAAAGAGCTGAACAAGAGCATTAACCCCGATGAAGCTGTTGCC 879 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGA 452068 |||||||| || || || ||||| |||||| | || ||| | ||| || | Sbjct 878 TATGGTGCAGCTGTCCAGGCAGCCATTCTATCTGG---AGACAAGTCTGAGAACGTTCAG 822 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 ||| | ||| | | ||||| || ||||| || ||||| ||||||| ||||| ||| | Sbjct 821 GATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGCGGAGTC 762 Query 452129 ATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGT 452188 |||||| | || || || || | || || || ||| || || || | Sbjct 761 ATGACTGTCCTCATCAAGCGCAATACCACCATCCCCACCAAGCAGACACAGACTTTCACC 702 Query 452189 ACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATG 452248 || ||| ||||| || |||||| ||||| |||| |||||| ||| | || ||| Sbjct 701 ACCTACTCTGACAACCAGCCTGGTGTACTCATTCAGGTGTATGAAGGTGAAAGGGCCATG 642 Query 452249 ACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGG 452308 || || || || || ||| | || || || ||| ||||| || | Sbjct 641 ACCAAGGACAACAACCTGCTTGGAAAGTTCGAGCTCACAGGCATCCCTCCAGCACCCCGT 582 Query 452309 GGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGT 452368 || ||||| ||||| |||| | ||| | ||||| ||||| || || ||||| | Sbjct 581 GGGGTCCCTCAGATTGAGGTTACTTTTGACATCGATGCCAATGGCATCCTCAATGTTTCT 522 Query 452369 GCAGTTGA-AAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACC 452426 || || || || | || | || ||| |||| || || || || || ||||| || || Sbjct 521 GCTGTAGATAAGAGCA-CAGG-AAAGGAGAACAAGATCACCATCACCAATGACAAGGGCC 464 Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATG 452486 | || ||| ||||||||||| ||||| | ||||| || || | ||||| ||| | Sbjct 463 GCTTGAGTAAGGAAGATATTGAGCGCATGGTCCAAGAAGCTGAGAAGTACAAGGCTGAGG 404 Query 452487 ATGA 452490 |||| Sbjct 403 ATGA 400 >seq189893 Length=523 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || ||||| || || || || |||||| | || Sbjct 493 ATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 434 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || || || |||||||||||||||||||||||||| Sbjct 433 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 374 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || |||||||| | |||||| | || || || Sbjct 373 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 314 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 313 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACT 276 >seq5191 Length=291325 Score = 91.5 bits (100), Expect = 6e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| || | ||||| || || ||||||||||| | || || || || || Sbjct 28333 GTTACTAATGCTGTCGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACG 28274 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | || || || |||||||| || || || ||||| Sbjct 28273 AAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAATTATCAACGAGCCGACAGCT 28214 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 28213 GCTGCCATAGCCTATGGTCT 28194 >seq9782 Length=92745 Score = 87.8 bits (96), Expect = 7e-12 Identities = 167/244 (68%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTC 451953 || || ||||| ||||| || ||||| || || || || || ||| | || | | | Sbjct 38653 GAGATCGTGCTGGTAGGTGGCTCTACCCGTATCCCCAAGATCCAAAAGCTGCTACAGGAC 38594 Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013 ||||| | || ||| | || |||||| | ||||||||||| |||||||| || Sbjct 38593 TTCTTCAAT----GGCAAAGAGCTCAACAAGAGCATCAATCCTGATGAGGCTGTTGCTTA 38538 Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070 |||||||| || ||||||||||| || | || ||| | ||| || | || Sbjct 38537 CGGTGCTGCTGTGCAAGCAGCTATCCTCATGGG---AGACAAGTCTGAGAACGTGCAGGA 38481 Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130 | | ||| | | ||||| || ||||| || || || | || ||||| |||||| |||| Sbjct 38480 TCTGCTGCTGTTGGATGTCACCCCTCTGTCCCTGGGCATCGAGACAGCCGGTGGAGTGAT 38421 Query 452131 GACT 452134 |||| Sbjct 38420 GACT 38417 >seq3277 Length=206865 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/148 (73%), Gaps = 3/148 (2%) Strand=Plus/Plus Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 ||||||| | | || | ||||| | | || || | | |||| |||||| |||||| Sbjct 51580 AAAAAGACAGTATATGTTGTTCTTCTCAGGTTGTTGAAAAGAAAGCCAAGCCCCATATTC 51639 Query 451209 AAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265 |||| || | ||||| | || ||||| |||||||||||||||||||| |||||| Sbjct 51640 AAGTCGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCTGAAGAAATTTCTGCTATGG 51699 Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGA 451293 | || || || ||||| || || ||||| Sbjct 51700 TCCTGACAAAGATGAAGGAGACGGCAGA 51727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1968975690471312