Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq263127 295 5e-74
seq9782 111 1e-18
seq3277 87.8 1e-11
seq17065 86.0 5e-11
seq5191 86.0 5e-11
>seq263127
Length=2033
Score = 295 bits (326), Expect = 5e-74
Identities = 959/1470 (65%), Gaps = 22/1470 (1%)
Strand=Plus/Plus
Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309
||||| | |||| ||||| || || ||||||||||| | ||||| || || |||||
Sbjct 511 TTATCTACAGCAGAAACATTGAGGATGCCATTGGCATCGATGTCAAAAGTAACCTCAATC 570
Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369
||||||||||| | | || || ||||| ||| | | || |||| || ||
Sbjct 571 TGAGGGACCCCACGGGGTGCTGGAGGGATGCCTGTGAGCTCGAACTTTCCAAGCAGGTTG 630
Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATT 517428
|| || || || | | |||||| || | | || || |||| | ||| || ||
Sbjct 631 TTGTCCTTGGTCATGGCCCTTTCACCTTCATACACCTGAATGAGTA-CACCAGGCTGGTT 689
Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 517487
|| || || || || || | |||| | | || || || || || || | | |
Sbjct 690 GTCAGAGTAGGTGGTGAA-AGTCTGTGTCTGCTTGGTGGGGATGGTGGTATTGCGCTTGA 748
Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547
| | ||||| | || || || ||||| | |||||| ||||||||||||||||| |
Sbjct 749 TGAGGACAGTCATGACTCCGCCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCA 808
Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607
|| | | || |||| || ||| | | ||| ||||| ||||| || | ||
Sbjct 809 AGAGCAGCAAATCCTGAACGTTCTCAGACTTGTCTCCAGATAGAATGGCTGCCTGGACAG 868
Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667
| |||||||| |||||||||||||| || |||| | | || || | ||| |||||||
Sbjct 869 CTGCACCATAGGCAACAGCTTCATCGGGGTTAATGCTCTTGTTCAGCTCTTTTCCATTGA 928
Query 517668 AAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACA 517726
| || | | ||||||| ||| | ||| || || | | || || || || || |||
Sbjct 929 AGAAGTCTTGCAGAAGTT-TCTGAATCTTGGGGATTCTGGTAGAACCACCCACCAAGACA 987
Query 517727 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 517786
|| ||||| | |||||| || ||||| || | ||| | | || || || || ||
Sbjct 988 ATATCATGGATCTGTGACTTGTCCAGCTTGGCATCTCGAAGGGCCTTCTCTACAGGGTCC 1047
Query 517787 AGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 517846
|| | | |||| ||| | | | || || ||| ||| | |||| | | |
Sbjct 1048 AGTGTGCCACGGAACAGGTCAGCATTCAACTCCTCAAATCGAGCCCGGGTAATGGAGGTA 1107
Query 517847 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906
| | |||||||| || | | |||||||| ||||| | | || || || ||
Sbjct 1108 TAGAAGTCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAG 1167
Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGA 517962
|| | || || || || || || || || | || | || | ||| | | || |
Sbjct 1168 AGGGTGCGCTTGGCCCGCTCGCAGGCCGTGCGGAGACGGCGGACAGCTCTCTTGTTCTCA 1227
Query 517963 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGAC 518021
|||| ||| | || | |||| |||||| || ||| | | || | || | |
Sbjct 1228 CTGATG----TCTTTCTTGTGCTTTCGCTTGAACTCAGCAATGAAATGAT-TGACCATTC 1282
Query 518022 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 518081
| || ||||||||||| || || || | || | ||| | || | | | || | ||||
Sbjct 1283 GGTTGTCAAAATCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTTGATTTGACCTCAAAAA 1342
Query 518082 GTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141
|||||| |||| || | | | |||||| || ||||| |||| |||||||| |
Sbjct 1343 TTCCATCCTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCCAAGTCAAAAATGA 1402
Query 518142 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201
| |||||| |||| | || ||||| | ||||| |||| ||||||||||||||
Sbjct 1403 GCACATTCCTTTCAGCTCCGACCTTCTTATCTAAGCCATAAGCAATAGCAGCAGCAGTTG 1462
Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261
||||||| || |||| | ||||| || |||||||| |||| |||||||| || || |
Sbjct 1463 GTTCATTGATGATTCGAAGTACATTGAGGCCAGCAATAGTTCCAGCATCTTTTGTTGCCT 1522
Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC-TTCTTTA 518320
||| || || || || || || || || || || | || || | || || |||||
Sbjct 1523 GTCGCTGAGAGTCATTGAAGTAAGCGGGCACTGTGACCACAGCGTTGGTAACAGTCTTT- 1581
Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380
|| | || || ||| ||| ||||| || | | || ||| || || | || |||
Sbjct 1582 CCGAGGTACGCTTCTGCAATTTCCTTCATCTTTGTCAGAACCATGGAGGACACTTCCTCT 1641
Query 518381 GGGGA-ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 518439
||| | | | | ||| | | |||| ||| |||| | | || | || |
Sbjct 1642 GGGTAGAAACTTTTTGTCTCCCCTTTG-TATTCCACTTGGACCTTGGGCCTGCCTGCATC 1700
Query 518440 ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 518499
||| | || | || ||||||| |||||||| || |||||| |||| |||
Sbjct 1701 ATTCACCACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCT 1760
Query 518500 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559
| || || | ||||| |||||||||| || ||||| || || |||||| | ||||
Sbjct 1761 ACGCCCGATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATT 1820
Query 518560 TTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTG 518618
||||| ||||| ||||| | || | ||||| || || || | |||||| ||| || |
Sbjct 1821 CTTGGCCGCATCCCCAATTA-ATCTCTCTGTGTCCGTGAAAGCAACATAGCTTGGTGTGG 1879
Query 518619 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 518678
|||| ||||| || ||||| ||||||||||| || || |||| || | ||||| ||||
Sbjct 1880 TGCGGTTACCCTGGTCATTGGCAATAATTTCCACCTTTCCATGCTGGAAGACACCCACAC 1939
Query 518679 AACTAAAAGTTGTTCCTAAATCAATACCAA 518708
| | || || || | |||||| ||||
Sbjct 1940 AGGAGTAGGTGGTGCCGAGATCAATGCCAA 1969
>seq9782
Length=92745
Score = 111 bits (122), Expect = 1e-18
Identities = 279/418 (67%), Gaps = 6/418 (1%)
Strand=Plus/Plus
Query 517257 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 517316
||||| | || || || |||||||||||||| | ||||| ||||| || || || ||||
Sbjct 38179 CGGCACTGACGTTCAGGATACCATTGGCATCTATGTCAAAAGTGACCTCGATCTGGGGGA 38238
Query 517317 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 517376
| || | | || || ||||| ||| | | |||| | ||||| || || || |
Sbjct 38239 CTCCACGGGGTGCCGGGGGGATGCCTGTTAGGTCAAATTTGCCCAGCAAGTTGTTGTCCT 38298
Query 517377 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAA-CTACAGTTTGATTATCTGA 517434
| || | | ||||||||| | | |||| || | || | | || || |||||
Sbjct 38299 TCGTCATAGCCCTCTCACCCTCGTACACCTGGACCAGGACGCTGC--TCTGGTTGTCTGA 38356
Query 517435 ATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATAT 517493
|| || || || |||| ||| ||| |||||| || ||||| | | || | |
Sbjct 38357 GTAGGTGGTGAAGG-TCTGAGTTTGTTTGGTAGGAATGGTGGTGTTACGCTTGATGAGAG 38415
Query 517494 TGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 517553
||||| | ||||| ||||| || | || || || ||||| |||||||| | || |
Sbjct 38416 CAGTCATCACTCCACCGGCTGTCTCGATGCCCAGGGACAGAGGGGTGACATCCAACAGCA 38475
Query 517554 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 517613
| || || | || ||| | | || | || ||||||||||| | ||||||||
Sbjct 38476 GCAGATCCTGCACGTTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCAC 38535
Query 517614 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671
| || |||||||| ||||||||||| | | | || || | ||| |||||||| ||
Sbjct 38536 CGTAAGCAACAGCCTCATCAGGATTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAA 38593
>seq3277
Length=206865
Score = 87.8 bits (96), Expect = 1e-11
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260
|| |||||||||||||||| ||||| | ||||||||| | || |||||||| || ||
Sbjct 52133 GGCTCATTAATAATTCTCATCACATTCAACCCAGCAATTGTCCCAGCATCTTTTGTAGCC 52074
Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306
|| | || | ||||||||| || || || ||||||| ||| ||||
Sbjct 52073 TGACGCTGAGCATCGTTAAAGTAGGCTGGCACAGTAACAACAGCAT 52028
>seq17065
Length=79502
Score = 86.0 bits (94), Expect = 5e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 366997 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 367056
|| || ||| | || || || ||||| || || ||| | ||| | | | |||||||||
Sbjct 53578 GTGGCTACAGTGGCGTTCGGAATGGGCATCAACAAAGCAGATATCCGGATGGTTATTCAT 53519
Query 367057 TATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116
|| || || || ||| | || ||| ||||||||||||||||| ||||| |||||||||
Sbjct 53518 TACGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCGTGAT 53459
Query 367117 GG 367118
||
Sbjct 53458 GG 53457
>seq5191
Length=291325
Score = 86.0 bits (94), Expect = 5e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||||| |||||||||||||| ||||| |||| | || || ||||| || |||||
Sbjct 29160 CAAAAACTGTATTGGTTGGATTCATTGCGACTTGGTTCTTTGCAGCATCGCCGATCAGCC 29219
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
||||| || || || | || || || || || || ||||| |||||||| ||||
Sbjct 29220 TCTCTGTATCCGTGAAGGCGACGTAGCTCGGCGTGGTCCGGTTACCCTGATCATTGGCAA 29279
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| ||||| || || || | ||| | || || ||||| | | || || || | ||| |
Sbjct 29280 TGATTTCCACCTTCCCGTGTTGGAACACGCCAACACAGGAATAGGTGGTGCCAAGATCGA 29339
Query 518703 TACCAATAGC 518712
| || | |||
Sbjct 29340 TTCCGACAGC 29349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3767604540916984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |