Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq263127 437 1e-117
seq5191 192 7e-44
>seq263127
Length=2033
Score = 437 bits (484), Expect = 1e-117
Identities = 1058/1589 (67%), Gaps = 16/1589 (1%)
Strand=Plus/Plus
Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624
||| ||||| ||| | || ||||| || || ||||||||||| ||||| ||||| ||
Sbjct 396 CTTCTCATCCTCAGCCTTGTACTTCTCAGCTTCTTGGACCATGCGCTCAATATCTTCCTT 455
Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTAT 6683
|| | ||||| ||||| || || || ||||| ||| ||| || | | |||||
Sbjct 456 ACTCAAGCGGCCCTTGTCATTGGTGATGGTGATCTTGTTCTCCTTT-CCTGTGCTCTTAT 514
Query 6684 CTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTG 6743
|| ||||| ||||| | || ||||| ||||| | || || | || | ||| || |
Sbjct 515 CTACAGCAGAAACATTGAGGATGCCATTGGCATCGATGTCAAAAGTAACCTCAATCTGAG 574
Query 6744 GTGTACCCCTCGG--TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTT 6801
| ||||| ||| ||| | || || || || | || || | ||||| | ||||
Sbjct 575 GG--ACCCCACGGGGTGCTGGAGGGATGCCTGTGAGCTCGAACTTTCCAAGCAGGTTGTT 632
Query 6802 ATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATC 6861
||| | | | | | |||||||||||| || | ||| || |||| || || ||
Sbjct 633 GTCCTTGGTCATGGCCCTTTCACCTTCATACACCTGAATGAGTACACCAGGCTGGTTGTC 692
Query 6862 TTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAAC 6921
|| | ||| | ||| | ||| | || || || ||||| | | || |
Sbjct 693 AGAGTAGGTGGTGAAAGTCTGTGTCTGCTTGGTGGGGATGGTGGTATTGCGCTTGATGAG 752
Query 6922 CGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAG 6981
||||| | || || |||||| | ||||| || ||||| || || ||||||||
Sbjct 753 GACAGTCATGACTCCGCCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAG 812
Query 6982 TAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041
| || || ||||| || | || || | || ||||| || ||||| | ||
Sbjct 813 CAGCAAATCCTGAACGTTCTCAGACTTGTCTCCAGATAGAATGGCTGCCTGGACAGCTGC 872
Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101
|| || || || || |||||||||||||| | || ||||| ||||| || || || |
Sbjct 873 ACCATAGGCAACAGCTTCATCGGGGTTAATGCTCTTGTTCAGCTCTTTTCCATTGAAGAA 932
Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161
|| | | || ||||| || ||||||| || || ||||| ||||| || || ||
Sbjct 933 GTCTTGCAGAAGTTTCTGAATCTTGGGGATTCTGGTAGAACCACCCACCAAGACAATATC 992
Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221
|| | | || || || | ||| | |||||||| | || || ||||| ||||
Sbjct 993 ATGGATCTGTGACTTGTCCAGCTTGGCATCTCGAAGGGCCTTCTCTACAGGGTCCAGTGT 1052
Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281
|||||||| ||| | || |||||||| || || ||||||||||| ||||||||
Sbjct 1053 GCCACGGAACAGGTCAGCATTCAACTCCTCAAATCGAGCCCGGGTAATGGAGGTATAGAA 1112
Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGT 7341
|||| || || || | |||||||| ||||| | | || | | || || | ||
Sbjct 1113 GTCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGT 1172
Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401
||||| || ||||| || ||||| || | ||| || | || | | ||| | ||
Sbjct 1173 GCGCTTGGCCCGCTCGCAGGCCGTGCGGAGACGGCGGACAGCTCTCTTGTTCTCACTGAT 1232
Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461
|||||||| || || || || ||||| || ||| || | | || || ||
Sbjct 1233 GTCTTTCTTGTGCTTTCGCTTGAACTCAGCAATGAAATGATTGACCATTCGGTTGTCAAA 1292
Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521
|||||| ||||| ||||| || || || || || | |||||| ||||| || || | ||
Sbjct 1293 ATCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTTGATTTGACCTCAAAAATTCCATCCTC 1352
Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGT 7581
||| | | | || |||||||| || ||||| |||| |||||||||||| || ||| |
Sbjct 1353 AATAGTGAGGATTGACACATCAAAAGTGCCACCTCCCAAGTCAAAAATGAGCACATTCCT 1412
Query 7582 ATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641
|| | | |||||||| | || || || ||||| || || ||||||||||| ||
Sbjct 1413 TTCAGCTCCGACCTTCTTATCTAAGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGAT 1472
Query 7642 AATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCG 7700
|| ||||| ||| || ||||||||||||||| | |||||||| || || ||||| || |
Sbjct 1473 GATTCGAAGTACA-TTGAGGCCAGCAATAGTTCCAGCATCTTTTGTTGCCTGTCGCTGAG 1531
Query 7701 AATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACG 7760
| || || ||||| || || || || || || |||| || || |||| ||||| ||||
Sbjct 1532 AGTCATTGAAGTAAGCGGGCACTGTGACCACAGCGTTGGTAACAGTCTTTCCGAGGTACG 1591
Query 7761 ATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC-AGCCGCAAAC 7819
||| || || || ||||| || || |||||||| || || | || || | ||||
Sbjct 1592 CTTCTGCAATTTCCTTCATCTTTGTCAGAACCATGGAGGACACTTCCTCTGGGTAGAAAC 1651
Query 7820 TGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATA 7879
| ||| || || || || | || |||| | | |||| | | ||| || |
Sbjct 1652 T-TTTTGTCTCCCCTTTGTATTCCACTTGGACCTTGGGCCTGCCTGCATCA---TTCACC 1707
Query 7880 ACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCG 7939
||| | | | ||| | |||||||| || || || |||| | | |||
Sbjct 1708 ACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCTACGCCCG 1767
Query 7940 ATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCC 7999
|| ||||| || ||||||||||||||||| |||||||||| || || ||||| |||
Sbjct 1768 ATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTGGCC 1827
Query 8000 GCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGA 8059
|| ||||| || | | || | | ||||| || || || || ||| || || ||
Sbjct 1828 GCATCCCCAATTAATC--TC-TCTGTGTCCGTGAAAGCAACATAGCTTGGTGTGGTGCGG 1884
Query 8060 TTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAA 8119
|| || ||||| || ||||||||||| || | | || |||| || || || ||
Sbjct 1885 TTACCCTGGTCATTGGCAATAATTTCCACCTTTCCATGCTGGAAGACACCCACACAGGAG 1944
Query 8120 TACGTTGTTCCTAAATCAATACCGATTGC 8148
|| || || || | |||||| || | |||
Sbjct 1945 TAGGTGGTGCCGAGATCAATGCCAACTGC 1973
>seq5191
Length=291325
Score = 192 bits (212), Expect = 7e-44
Identities = 370/543 (68%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| || || || || || ||||| ||||| || | || ||||| ||||| ||||| ||
Sbjct 27528 GCACCATAAGCCACAGCTTCATCAGGGTTGATGCTCTTGTTCAGCTCTTTGCCGTTGAAG 27587
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| | || | ||||| || ||||| || ||||| ||||| |||| || ||
Sbjct 27588 AAGTCCTGCAGCAGCTTCTGAATCTTTGGGATACGAGTCGACCCACCAACCAGCACAATG 27647
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | |||||| |||| ||| | || || || | ||||| ||||| ||||
Sbjct 27648 TCATGGATCTGCGATTTGTCGAGCTTGGCATCGCGCAGGGCCTTTTCCACAGGATCCAGG 27707
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
||||||| ||| | ||| || ||||| || || | ||||||||| || |||
Sbjct 27708 GTGCCGCGGAACAGGTCGGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGTGTAG 27767
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| |||| || || || | || ||||||||||| | | || | | || || |
Sbjct 27768 AAGTCAATACCCTCATAGAGAGAGTCAATTTCAATACTGGCCTGCGTGCTAGATGACAGA 27827
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| |||||||| ||||| || || || || | ||||| | || | | ||| | |
Sbjct 27828 GTACGCTTTGCACGCTCGCATGCGGTGCGGAGGCGACGGACTGCTCTCTTGTTCTCAGTG 27887
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456
|| |||||||| || || || || || || | |||||| | || | | | |
Sbjct 27888 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTTG--- 27944
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || ||||| ||||||||||| || || || || || | ||| || |||||||| ||
Sbjct 27945 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 28004
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||||| | | | || |||||||| || ||||| || |||||||| || || |||
Sbjct 28005 TCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACG 28064
Query 7577 TTC 7579
|||
Sbjct 28065 TTC 28067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633018093585760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |