Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_016158.1
Length=49576
Score E
Sequences producing significant alignments: (Bits) Value
seq151818 136 1e-27
seq130478 132 2e-26
>seq151818
Length=305
Score = 136 bits (150), Expect = 1e-27
Identities = 150/197 (76%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 43144 GACGACTGCGCCACCGCTGCTATCTGCGTCACCTGTCATTCAGAG-ATTGATAACGGGAA 43202
|| || |||||||| || || |||||||| ||| || | || || || |||||||
Sbjct 302 GATGATTGCGCCACGGCGGCGATCTGCGTTTGCTGCCACG-ACAGCATCGACAACGGGAG 244
Query 43203 GGGGCTGAGCCGTGACGAGCGCCGCCAGTTAATGGATCGAGCCATTGTCTTAACCGTTAT 43262
||| || ||||| ||||||||| | ||||| || || || || | || |||||
Sbjct 243 CAAGCTATCGCGCGACGAACGCCGCCAGCTGATGGACCGCGCTATCGTTCTGACTGTTAT 184
Query 43263 CCAGATCGCCCGTCGTGGCCTAGTGGTGCCCGCATGAATATTTACGATATCACTCCTGTC 43322
|||||||||||| | ||| || |||||||| ||||||| |||||||| ||||| || ||
Sbjct 183 CCAGATCGCCCGCCTTGGGCTGGTGGTGCCAGCATGAACATTTACGACATCACGCCGATC 124
Query 43323 AGCAAGCCCCGTATGAC 43339
||||||||||||||||
Sbjct 123 GGCAAGCCCCGTATGAC 107
>seq130478
Length=244
Score = 132 bits (146), Expect = 2e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26391 TTTCCCGATCTGATCCCTTAACACCCTGCATGCGGTATCATTCAGAGCCACGCCGATAGC 26450
|||||| | ||| |||| | |||| | || || | || ||||| || || || || ||
Sbjct 244 TTTCCCCAGCTGCTCCCGCAGCACCTTACAGGCCGATTCGTTCAGGGCGACCCCTATCGC 185
Query 26451 CTTGCCCGCCTTCGCGTTCTCCGGATTTACCCATGCAACCTTTCTCTGCATATCGACCTG 26510
| | || || ||||||| ||| |||| | |||||| ||||| ||||||||||| | ||
Sbjct 184 CCTTCCTGCTTTCGCGTCCTCGGGATGAATCCATGCGACCTTCCTCTGCATATCAATTTG 125
Query 26511 CTGCCACTCCAGATCAATGATGTTGGAGCGGCGCAGGCCGGTTGCCAGTGCAAATATCAC 26570
| |||||||||||| ||||||| || | |||||| || || ||||||||||| || ||
Sbjct 124 CGACCACTCCAGATCTGTGATGTTCGACCTGCGCAGCCCCGTCGCCAGTGCAAAAATAAC 65
Query 26571 CACCGGCTTTATCGACTCCGGCA 26593
|| || || || ||| ||||
Sbjct 64 AACTGGTTTCATATGCTCGGGCA 42
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 158020184686384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |