Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq151818 136 1e-27 seq130478 132 2e-26 >seq151818 Length=305 Score = 136 bits (150), Expect = 1e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 43144 GACGACTGCGCCACCGCTGCTATCTGCGTCACCTGTCATTCAGAG-ATTGATAACGGGAA 43202 || || |||||||| || || |||||||| ||| || | || || || ||||||| Sbjct 302 GATGATTGCGCCACGGCGGCGATCTGCGTTTGCTGCCACG-ACAGCATCGACAACGGGAG 244 Query 43203 GGGGCTGAGCCGTGACGAGCGCCGCCAGTTAATGGATCGAGCCATTGTCTTAACCGTTAT 43262 ||| || ||||| ||||||||| | ||||| || || || || | || ||||| Sbjct 243 CAAGCTATCGCGCGACGAACGCCGCCAGCTGATGGACCGCGCTATCGTTCTGACTGTTAT 184 Query 43263 CCAGATCGCCCGTCGTGGCCTAGTGGTGCCCGCATGAATATTTACGATATCACTCCTGTC 43322 |||||||||||| | ||| || |||||||| ||||||| |||||||| ||||| || || Sbjct 183 CCAGATCGCCCGCCTTGGGCTGGTGGTGCCAGCATGAACATTTACGACATCACGCCGATC 124 Query 43323 AGCAAGCCCCGTATGAC 43339 |||||||||||||||| Sbjct 123 GGCAAGCCCCGTATGAC 107 >seq130478 Length=244 Score = 132 bits (146), Expect = 2e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 26391 TTTCCCGATCTGATCCCTTAACACCCTGCATGCGGTATCATTCAGAGCCACGCCGATAGC 26450 |||||| | ||| |||| | |||| | || || | || ||||| || || || || || Sbjct 244 TTTCCCCAGCTGCTCCCGCAGCACCTTACAGGCCGATTCGTTCAGGGCGACCCCTATCGC 185 Query 26451 CTTGCCCGCCTTCGCGTTCTCCGGATTTACCCATGCAACCTTTCTCTGCATATCGACCTG 26510 | | || || ||||||| ||| |||| | |||||| ||||| ||||||||||| | || Sbjct 184 CCTTCCTGCTTTCGCGTCCTCGGGATGAATCCATGCGACCTTCCTCTGCATATCAATTTG 125 Query 26511 CTGCCACTCCAGATCAATGATGTTGGAGCGGCGCAGGCCGGTTGCCAGTGCAAATATCAC 26570 | |||||||||||| ||||||| || | |||||| || || ||||||||||| || || Sbjct 124 CGACCACTCCAGATCTGTGATGTTCGACCTGCGCAGCCCCGTCGCCAGTGCAAAAATAAC 65 Query 26571 CACCGGCTTTATCGACTCCGGCA 26593 || || || || ||| |||| Sbjct 64 AACTGGTTTCATATGCTCGGGCA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158020184686384