Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2507 127 4e-24
seq13542 122 2e-22
seq9972 87.8 3e-12
>seq2507
Length=1108177
Score = 127 bits (140), Expect = 4e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 241430 AGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGAC 241489
|| |||| |||||| | || || | | ||||| || ||| | ||||| | |
Sbjct 895493 AGCTGGGAGACCTGGGCGCGGAGGAGGTTGGCGGTGGCGGCCAGCTCGGCGTTCTGCCCC 895552
Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549
|||||| ||||||| |||||||||||||| |||||||| ||||| || ||||| |||||
Sbjct 895553 TTGAGCGCCTTCACCTTCTCCTCCAGCCGGGCGATGCGCTCCAGCTTCCGCCGCCGGCAC 895612
Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609
|||| ||| || | ||||||||| || | ||| || |||||||| | || |||||| |
Sbjct 895613 TTGGAGGCGGCGATGCGGTTCCGCAGCCGCTTGCGCTCCGCCTTCAGCCGCTCCTGGCTC 895672
Query 241610 TCCATGTCGATCGGAGAC 241627
||| ||| | ||| |||
Sbjct 895673 TCCGCGTCCAGCGGCGAC 895690
>seq13542
Length=76512
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474
||||||| ||| ||||| ||||| ||||| || || || | | ||||| || |||
Sbjct 951 AGGACCTTCTGCTTGAGCTGGGCGACCTGCTCGCGGAGCAGGCTGGCGGTGGAGGCCAGC 892
Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534
| | ||| | |||||| |||||| ||||||||||| || | ||| || |||||
Sbjct 891 TCCGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCCAGGCGGGAGATCCGCTCCAGC 832
Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594
|| | | |||||| |||| ||| || | ||| |||| || | ||| ||||||||||||
Sbjct 831 TTCCTCTTGCGGCACTTGGAGGCGGCGATGCGATTCCTCAGCCGCTTTCGTTCCGCCTTG 772
Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626
|| || ||||| ||||||||||| || ||
Sbjct 771 ATACGCTCCTGCGTGTCCATGTCGATGGGGGA 740
>seq9972
Length=29549
Score = 87.8 bits (96), Expect = 3e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872
|||| || |||||| ||||| || | ||| || || ||| ||||| |||| | | |
Sbjct 10620 ACTCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAAGAAGAGGTCTCTGGCTCGCTGC 10561
Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932
|| || ||||| ||| || | || ||||| |||||||||||| ||||| |||
Sbjct 10560 TCTTCTTTTCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGC 10501
Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963
|||| |||||||||||| || || || ||||
Sbjct 10500 TCCAGGTAGATGGCAAAAGCCCCGGGTCTCT 10470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928431214965760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |