Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq263127 203 2e-46
seq9782 120 2e-21
seq189893 95.1 8e-14
seq21304 87.8 1e-11
seq12144 86.0 4e-11
>seq263127
Length=2033
Score = 203 bits (224), Expect = 2e-46
Identities = 381/553 (69%), Gaps = 8/553 (1%)
Strand=Plus/Minus
Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387
|||| |||| |||||| | || || || ||| ||||| | ||| | || |||| ||
Sbjct 1974 TGCAGTTGGCATTGATCTCGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAA 1915
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
|| ||||| |||||||||||||| ||||| | || |||||| |||||| |||| ||
Sbjct 1914 GGTGGAAATTATTGCCAATGACCAGGGTAACCGCACCACACCAAGCTATGTTGCTTTCAC 1855
Query 474448 TGAAACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTA 474506
|| || || | || | ||||| ||||| || || |||| | |||| || || |
Sbjct 1854 GGACACAGAGAGAT-TAATTGGGGATGCGGCCAAGAATCAGGTTGCAATGAACCCCACCA 1796
Query 474507 ATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAAT 474566
| || |||||||||| ||| | |||| || |||| ||||||||| | ||| || |
Sbjct 1795 ACACAGTTTTTGATGCCAAACGTCTGATCGGGCGTAGGTTTGATGATGCTGTTGTTCAGT 1736
Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA- 474625
|||||||| || ||||| || | |||| | |||| || || | || | | ||
Sbjct 1735 CTGATATGAAGCACTGGCCCTTCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTCCAAG 1676
Query 474626 -GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684
| |||||| ||| || || ||| || | || || || | || || |||||| |
Sbjct 1675 TGGAATACA--AAGGGGAGACAAAAAGTTTCTACCCAGAGGAAGTGTCCTCCATGGTTCT 1618
Query 474685 AGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743
| || ||||| ||| || | || || ||| |||| || || | || ||
Sbjct 1617 GACAAAGATGAAGGAAATTGCAGAAGCGTACCTCGGA-AAGACTGTTACCAACGCTGTGG 1559
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
| || || || || || || ||||| ||||| || || ||||| |||||||| |||| |
Sbjct 1558 TCACAGTGCCCGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAACTA 1499
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
|||| || || ||||| | || || || ||||||||||| || || || |||||||||
Sbjct 1498 TTGCTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATG 1439
Query 474864 GTCTTGATAAGAA 474876
| | ||||||||
Sbjct 1438 GCTTAGATAAGAA 1426
Score = 183 bits (202), Expect = 2e-40
Identities = 462/697 (66%), Gaps = 4/697 (1%)
Strand=Plus/Minus
Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546
||||| | || || || || || || ||||| | || || || || || | | |
Sbjct 1205 CGTCTCCGCACGGCCTGCGAGCGGGCCAAGCGCACCCTCTCCTCCAGCACCCAGGCCAGT 1146
Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606
|||| |||||||||| | ||| |||||||| | |||| ||||| ||||| |
Sbjct 1145 ATTGAGATTGATTCTCTCTATGAGGGAATTGACTTCTATACCTCCATTACCCGGGCTCGA 1086
Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666
||||| || | | |||| || || | ||| | || || || || | | ||
Sbjct 1085 TTTGAGGAGTTGAATGCTGACCTGTTCCGTGGCACACTGGACCCTGTAGAGAAGGCCCTT 1026
Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726
||||| | || || ||||| ||||| ||||||| ||||| | || || ||||| ||
Sbjct 1025 CGAGATGCCAAGCTGGACAAGTCACAGATCCATGATATTGTCTTGGTGGGTGGTTCTACC 966
Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGA 475785
||||| || || || ||||| | || | | || ||||| ||| || | || |
Sbjct 965 AGAATCCCCAAGATTC-AGAAACTTCTGCAAGACTTCTTCAATGGAAAAGAGCTGAACAA 907
Query 475786 AAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATC 475845
|| | || || |||||||||||||| ||||| || |||||||| ||||| ||| ||||
Sbjct 906 GAGCATTAACCCCGATGAAGCTGTTGCCTATGGTGCAGCTGTCCAGGCAGCCATTCTATC 847
Query 475846 AGGTCAATCAGAC-GAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCAT 475904
|| | || | ||||| | | || | | || | || || ||||| |||||
Sbjct 846 TGGAGACA-AGTCTGAGAACGTTCAGGATTTGCTGCTCTTGGATGTCACTCCTCTTTCCC 788
Query 475905 TAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCC 475964
| ||| ||||||| | ||| || | |||||| || || | | ||||| | ||||
Sbjct 787 TTGGTATTGAAACTGCTGGCGGAGTCATGACTGTCCTCATCAAGCGCAATACCACCATCC 728
Query 475965 CATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCC 476024
| ||| | || | || |||| || ||||| || || | |||| ||| |
Sbjct 727 CCACCAAGCAGACACAGACTTTCACCACCTACTCTGACAACCAGCCTGGTGTACTCATTC 668
Query 476025 AAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATC 476084
| | | |||||||||||| | || || || || ||| ||||||| || | |
Sbjct 667 AGGTGTATGAAGGTGAAAGGGCCATGACCAAGGACAACAACCTGCTTGGAAAGTTCGAGC 608
Query 476085 TTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTG 476144
| ||| || ||||| || ||| | || || ||||| ||||| ||||||||||| || |
Sbjct 607 TCACAGGCATCCCTCCAGCACCCCGTGGGGTCCCTCAGATTGAGGTTACTTTTGACATCG 548
Query 476145 ATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
|||| ||||| || || |||||| ||||| |||||
Sbjct 547 ATGCCAATGGCATCCTCAATGTTTCTGCTGTAGATAA 511
>seq9782
Length=92745
Score = 120 bits (132), Expect = 2e-21
Identities = 362/552 (66%), Gaps = 8/552 (1%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
||||| || || || || || || || ||| || || | ||| | || |||| |||
Sbjct 39640 GCAATCGGCATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTTTCAGCATGGCAAA 39581
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
|| || || || ||||||||||| || || | || || || || || | || |||
Sbjct 39580 GTGGAGATCATCGCCAATGACCAGGGCAACCGCACCACGCCCAGCTACGTGGCCTTCACT 39521
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|| || || | || || || |||||||| || | || | || || ||| ||
Sbjct 39520 GATACAGAGCGCCTCATCGGCGATGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 39461
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568
|| || |||||||| || | | ||||| || || | |||||| |||| || || ||
Sbjct 39460 ACCATCTTTGATGCCAAGCGTCTCATTGGCCGCAAGTATGATGACCCCACGGTGCAGGCT 39401
Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC- 474627
|| ||| || ||||| || ||| | || | ||||| || || | | |||
Sbjct 39400 GACATGAAGCACTGGCCGTTCCGTGTGGTGAACGAGGGTGGCAAGCCCAAGGTGCAAGTG 39341
Query 474628 -AATACACGCAGGTGAAACTAA-ACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| |||| | ||||| | || || | ||| || || | || || ||||| |
Sbjct 39340 GAGTACAAG--GGTGAGATGAAGACCTTCTTC-CCAGAGGAGATCAGCTCCATGGTCCTC 39284
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
|||| ||||| | | || ||| | ||||| || | | ||| |||| || ||
Sbjct 39283 ACCAAGATGAAGGAGATTGCTGAGG-CGTATCTGGGGCGCAAGGTACAGAATGCTGTCAT 39225
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
|| || || || || || ||||| || || || || || || |||||||| || | ||
Sbjct 39224 CACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 39165
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
| || |||||||| | |||||||| ||||| || ||||||||||| | || |||||
Sbjct 39164 CACTGGCCTTAATGTGATGCGTATTATCAATGAGCCCACAGCAGCCGCGATAGCCTATGG 39105
Query 474865 TCTTGATAAGAA 474876
|| || |||||
Sbjct 39104 CCTGGACAAGAA 39093
>seq189893
Length=523
Score = 95.1 bits (104), Expect = 8e-14
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 480564 ACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTT 480621
|| |||||||| || ||| |||| ||| || || |||| | ||| | | |||||
Sbjct 285 ACCAGATGAAGGGTGGACTC-CTTTTGAATG-TTGTAGTCAGACAAAGTCCGGCCATCTT 342
Query 480622 CAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTT 480681
| || ||||| |||||||| || || | || ||||||||||||||||||||||| || |
Sbjct 343 CCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCT 402
Query 480682 GAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTT 480741
| ||||| || ||| ||| ||||| || | | || | || || || || ||||
Sbjct 403 GGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTT 462
Query 480742 TACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || || ||||| || || || ||
Sbjct 463 TCCCCGTAAGGGTCTTCACAAAGATCTG 490
>seq21304
Length=31350
Score = 87.8 bits (96), Expect = 1e-11
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
|||||| || ||||| |||||||| || || | || |||||||| ||||| ||||||||
Sbjct 427 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 486
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| || ||||| |||||| ||||| || ||| || | | || ||||| ||
Sbjct 487 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGAT 546
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || || ||||| || || || ||
Sbjct 547 GGTCTTGCCCGTCAGGGTCTTCACAAAGATCTG 579
>seq12144
Length=38566
Score = 86.0 bits (94), Expect = 4e-11
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614
|| || || |||||||| || ||| ||| || | || || || | || || | |
Sbjct 1356 AGGCGCAGCACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 1297
Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674
|||||| || ||||| || ||||| || || | || ||||| || ||||| ||||||
Sbjct 1296 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCC 1237
Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734
||||| || |||||| || ||| ||||| || ||| || | || |||||
Sbjct 1236 TTGTCCTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTG 1177
Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || |||||||| || ||||| || || || ||
Sbjct 1176 ATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTG 1142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3256753555641872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |