Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq1256 250 3e-61
seq2341 140 4e-28
>seq1256
Length=1756643
Score = 250 bits (276), Expect = 3e-61
Identities = 653/990 (66%), Gaps = 7/990 (1%)
Strand=Plus/Minus
Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104
|||||||||||| || |||| ||||| || || || |||||| || ||| || |
Sbjct 255188 TGTGTCGCAGATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 255129
Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164
|||| || || | ||||| ||| |||| ||||||| || |||||| ||| || |
Sbjct 255128 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAGGTCTCCTACCCCAAAAA 255072
Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224
| ||||| || || | || || || |||| || ||||| | || || || | |||||
Sbjct 255071 CACAGACAGAGCGAACATGAACTCCACTGCATGGTGGGTAAGGTGCACCCTTGGACACGT 255012
Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284
||||||| ||||||||||||| ||||||||||| | || | |||||| || || |
Sbjct 255011 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACATCAT 254952
Query 160285 ATTTGTACATCAGGGGA-ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343
| |||| || || || || ||||| || || | || || | ||| | || |||||
Sbjct 254951 ACTTGT-CACTAGAAGACACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAT 254893
Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403
| || ||| || |||||||| || || || | ||| || || |||| | ||| |||
Sbjct 254892 AAGTATTCATCTGGGCTGTAAGTATCTTTTGCCCACTCAATTAACTTAACTATTTTGCTG 254833
Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463
| | |||| || | |||| | || | ||| || || || || || ||
Sbjct 254832 CTTTGTAATACGTATTCTACAAATCTTCTGCTAACTATAAAATAGGCACTACCAGAAAAA 254773
Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523
|| || | | ||| || | |||||| || ||||| | || |
Sbjct 254772 ATTGGAGTACTGAGAGGTGGTAGCTGTTTGTCTATGCCTGTGTTTTTTATTTTACCATCA 254713
Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583
| | | | || | || |||||||| || || | ||||| |||||| ||
Sbjct 254712 ATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCCGTTTCC 254653
Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643
| ||||| |||| | || | ||| | | || || || || |||| ||||| |
Sbjct 254652 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATA 254593
Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703
|||||||| | || || | |||||||| ||| ||||| || | || ||| ||
Sbjct 254592 GGAAAGTCCATGCCACAGAGGTTTATCAGGTATTTCCAGTTTGAACTTCTTCTGTGGAGA 254533
Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763
|| ||||||| ||||| ||||||||||| |||||||||||||| || || || |||||
Sbjct 254532 TCTTTCATGCAGTTAATGTCTGCCTGCACCCGGCTCCAGGAAGCATATACAACACTCTCT 254473
Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823
| | |||| | |||||| ||||| ||||| || || |||||| ||| | ||| ||
Sbjct 254472 AACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAG-CAGCAAA 254414
Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882
|| | || | | |||| ||| || || | ||| || | |||||||| || |||||
Sbjct 254413 AAAAGATTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGAT 254354
Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942
| || || | || || | |||||| || || |||| | ||| || || || || ||
Sbjct 254353 TGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATGGAATAAGCAAT 254294
Query 160943 CGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAA 161002
||||| || | || || || || | | | | | ||| |||| |||||| | ||
Sbjct 254293 TGGAAATTCTGCTTCTTCATTGCTGAGAGGCTCCATAATGTATTTTCTGGTCTTGGTGAA 254234
Query 161003 ATAATCACAATCCCGCGTCATGTTGATATA 161032
| |||| || |||||||| |||||
Sbjct 254233 GGAGGCACAGTCTGCTGTCATGTTAATATA 254204
>seq2341
Length=450988
Score = 140 bits (154), Expect = 4e-28
Identities = 239/346 (69%), Gaps = 3/346 (1%)
Strand=Plus/Minus
Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103
||||| ||||| | || ||||| || ||| |||| |||| || | ||||||
Sbjct 177445 CTGTGGCGCAGGTACTCCTCCAGGCACAGGATGGCGGCGTCGTCCACCACGGGGTCGAAC 177386
Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163
|| || || || || ||||| | ||| || |||||| ||||||| || |||| |
Sbjct 177385 TTGTTGGCCAAGAGGTGGTGC---TGCTGGAGCATCCAGGGCACGTCGCCCACCCCGTAG 177329
Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223
| ||||||||| || |||| |||| |||| |||||||| | || || || |
Sbjct 177328 ATGCAGACGGAGCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGCGCGCCCTTGCTGGGG 177269
Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283
|| || || |||||||||||| || | | || || || | ||| || ||| | |
Sbjct 177268 TCGCCCTCCAGGTACTGCCACTTGACCAGGCGGGGTAGGGCGTTCATATCCGAGAGCTGG 177209
Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343
| |||| || |||| | || || || ||||| ||||| || | |||||||||||
Sbjct 177208 AACTTGTCATTCTGGGGCAGGGAGCCTGGCACGCCAGGCATGCGGTTGAGGGTGGCCCAG 177149
Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT 160389
| ||| ||||| |||||||| |||||||| | ||| || | |||||
Sbjct 177148 ATGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCAAAGAACT 177103
Score = 116 bits (128), Expect = 4e-21
Identities = 242/358 (68%), Gaps = 12/358 (3%)
Strand=Plus/Minus
Query 160618 TGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACT 160677
|||| ||||| ||| ||||||| || || ||||| ||||| ||| | | || |
Sbjct 176877 TGACTATCTCAGCGTTGGTCTTGATGGGGAAATCGGTGCCGCAGGTGTTGAGGAGATAGT 176818
Query 160678 TCCATTTC---GCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734
|||| | | |||| | ||||||| |||||| || | |||||||||| |
Sbjct 176817 GCCATGGCATGGGGCTCTGCAA---CAGGTCCTGCATGCAGTTGAGGTCTGCCTGCAGCC 176761
Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794
|| |||||| || || || || || || || || |||||||||| || ||| |
Sbjct 176760 GGGACCAGGAGGCATAGACCACCTTTTCCAGGCGGCTAGCCACAAAGATATTGGGGAAGC 176701
Query 160795 ACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGC---CTTTCGGTCCACGT 160851
| | ||||| || ||| ||| ||| || | ||| ||| | ||| ||||
Sbjct 176700 AGGCTACGATGGCCCGCACGGCCTCCTGGAAGAT---AGCCGGGGACTTCCTGTCAACGT 176644
Query 160852 GCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTA 160911
| | ||| || | |||||| || | ||||| || ||| || | || |||||||||||| |
Sbjct 176643 GGATGCAGTAGACGTTCTGGGGGGTGTAGAGGGACCTCAGGAGCCGCTCGAACATCTCGA 176584
Query 160912 TCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969
| || | ||||| || || |||||||| || || ||||| | |||||| | |||||
Sbjct 176583 TGTTGTTGTGGATGACCATGGAGTAGGCAATGGGGAACTCTGCCTCCTCCTGGCTCAG 176526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 575297319812640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |