Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq189893 118 2e-21 seq6632 96.9 7e-15 >seq189893 Length=523 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | || | ||| ||| || || || || |||| Sbjct 266 ACCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGA-ATGTTGTAGTCAG 324 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || || |||| |||| || |||||||||||||| | ||||| |||||||| | Sbjct 325 ACAAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAG 384 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || || |||||||| ||||| || || | ||| | Sbjct 385 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAA 444 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | || || || |||||||| || || | || || | ||| |||||||| Sbjct 445 CCTCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 493 >seq6632 Length=32526 Score = 96.9 bits (106), Expect = 7e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| || ||| |||| ||||||| |||||| | ||| |||||||||||||| || | Sbjct 9694 CCTCATCTCTACTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 9635 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | |||||||| |||||||||||| | ||||||||| || || || || ||||| | Sbjct 9634 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGCTGCAAAAG 9575 Query 49966 CTA 49968 ||| Sbjct 9574 CTA 9572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981120177731400