Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq189893 107 3e-18
seq6632 98.7 2e-15
>seq189893
Length=523
Score = 107 bits (118), Expect = 3e-18
Identities = 166/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | || | ||| || ||| ||
Sbjct 257 TTTCTTAGCACCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTT 316
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| || | || |||| || ||||||||||| || | ||||| ||
Sbjct 317 GTAGTCAGACAAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTG 376
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| |||||| || ||
Sbjct 377 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGA 436
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
| ||| || || || || |||||||| || || | || || | || ||||||||
Sbjct 437 GGGTTCAACCTCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 493
>seq6632
Length=32526
Score = 98.7 bits (108), Expect = 2e-15
Identities = 87/109 (80%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 39162 ATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATT 39221
|||| ||||||| |||||| | ||| |||||||||||||| || || |||||||| |||
Sbjct 9680 ATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAGCCAAAAAATT 9621
Query 39222 GATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTA 39270
||||||||| | ||||||||| || || ||||| ||||| ||||
Sbjct 9620 GATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGCTGCAAAAGCTA 9572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902122304431200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |