Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq54380 170 2e-36 seq34758 170 2e-36 seq23486 170 2e-36 seq15708 170 2e-36 seq12637 170 2e-36 seq10884 167 3e-35 seq93092 156 5e-32 seq231181 134 2e-25 seq34658 134 2e-25 seq34115 134 2e-25 seq6632 111 2e-18 seq2755 96.9 4e-14 seq5462 91.5 2e-12 seq46538 89.7 6e-12 seq144806 86.0 8e-11 >seq54380 Length=988 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 285 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 344 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 345 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 404 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 405 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 464 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 465 GCACCTGCTTCAGCACCTTGTA 486 >seq34758 Length=12360 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 6711 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 6770 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 6771 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 6830 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 6831 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 6890 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 6891 GCACCTGCTTCAGCACCTTGTA 6912 >seq23486 Length=28023 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 4842 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 4783 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 4782 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 4723 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 4722 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 4663 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 4662 GCACCTGCTTCAGCACCTTGTA 4641 >seq15708 Length=16723 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 599 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 658 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 659 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 718 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 719 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 778 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 779 GCACCTGCTTCAGCACCTTGTA 800 >seq12637 Length=23738 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 10205 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 10264 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 10265 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 10324 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 10325 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 10384 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 10385 GCACCTGCTTCAGCACCTTGTA 10406 >seq10884 Length=1291 Score = 167 bits (184), Expect = 3e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 592 GCTTGGCCAGCTCACCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 651 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 652 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 711 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 712 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 771 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 772 GCACCTGCTTCAGCACCTTGTA 793 >seq93092 Length=1073 Score = 156 bits (172), Expect = 5e-32 Identities = 160/210 (76%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | || Sbjct 281 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 340 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 341 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGAGAGGCCTCGCCGGCGATGCGCTCGAAGA 400 Query 1254463 TGTCGTTGAC--------AAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCAC 1254514 ||||||| || ||| |||||||||| ||| | |||| ||||||||| Sbjct 401 TGTCGTTCACGAAGGAGNAAAGGAGTTCATGATGCTCATGGCCTTGGACGAGATGCCCGT 460 Query 1254515 GTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 |||||||||||||||||| ||||||||||| Sbjct 461 GTCGGGGTGCACCTGCTTCAGCACCTTGTA 490 >seq231181 Length=910 Score = 134 bits (148), Expect = 2e-25 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||| ||||| ||||| || | | || Sbjct 838 GCTTGGCCAGCTCTCCTGGGAGCAGCAGGCGCACGGCTGTCTGAATCTCCCGGGAGGTGA 779 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | || ||||| ||| ||| || ||||||| || | | Sbjct 778 TGGTGGATCGCTTGTTGTAATGGGCCAGGCGGGAGGCTTCTCCAGCGATGCGCTCAAAGA 719 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 718 TGTCATTGACAAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 659 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||||||||||| Sbjct 658 GGACCTGCTTTAGCACCTTGTAGA 635 >seq34658 Length=2033 Score = 134 bits (148), Expect = 2e-25 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 1254351 AGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTG 1254410 || |||||| ||| | || | |||||| ||||||||||| |||| | ||| ||| | Sbjct 1839 AGCTCGCCGGGCAGCAGGAGCCTCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAG 1780 Query 1254411 CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTG 1254470 |||||||| |||| ||||| || ||||| ||||||| |||| ||||||||| Sbjct 1779 CGCTTGTTGTAGTGAGCCAGGCGCGAAGCCTCCCCCGCGATGCGCTCGAAGATGTCGTTG 1720 Query 1254471 ACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1254530 || || || ||||||| ||| | |||| ||||||||| |||||||||||| ||| Sbjct 1719 ACGAAGGAATTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACTTGC 1660 Query 1254531 TTGAGCACCTTGTA 1254544 || ||||||||||| Sbjct 1659 TTCAGCACCTTGTA 1646 >seq34115 Length=39923 Score = 134 bits (148), Expect = 2e-25 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | |||||||||||| ||||| ||||| || | | || Sbjct 26861 GCTTGGCCAGCTCTCCTGGGAGCAGCAGGCGCACGGCTGTCTGAATCTCCCGGGAGGTGA 26802 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | || ||||| ||| ||| || ||||||| || | | Sbjct 26801 TGGTGGATCGCTTGTTGTAATGGGCCAGGCGGGAGGCTTCTCCAGCGATGCGCTCAAAGA 26742 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 26741 TGTCATTGACAAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 26682 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||||||||||| Sbjct 26681 GGACCTGCTTTAGCACCTTGTAGA 26658 >seq6632 Length=32526 Score = 111 bits (122), Expect = 2e-18 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTG 869889 ||||||||| || ||||||| |||||||||||||| |||||||||| ||| | | || Sbjct 6753 CACCTCCTCCGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTG 6694 Query 869890 GTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 ||| |||| ||||||| ||| |||||| ||||||||| |||||||| || || Sbjct 6693 GTACTGGATGGGGAAGATGACGAAGCGGCGGGGGTTGTCCCGCAACAGCGGCTC 6640 >seq2755 Length=433251 Score = 96.9 bits (106), Expect = 4e-14 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || | |||||| ||||| | |||||| || || Sbjct 153335 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCTCACGGCCGTCTGCACCTCGCGGCTGGTGA 153276 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| | ||| | || ||||| || |||||| | | | | || |||| | Sbjct 153275 TGGTGGAGCGGTGGTTGTACTGGGCCAGGCGCGAGGCCTCCGAGGCCAGCCGCTCGAAGA 153216 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | ||| ||||||||| ||| |||| Sbjct 153215 TGTCATTGACGAAGGAGTTCATGATGCTCATGGCCTTAGAGGAGATGCCAGTGTCTGGGT 153156 Query 1254523 GCACCTGC 1254530 |||||||| Sbjct 153155 GCACCTGC 153148 >seq5462 Length=4248 Score = 91.5 bits (100), Expect = 2e-12 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095 ||||||||||| || || ||| ||||| ||| | |||||||| | | |||| | Sbjct 1378 CCCGAGAGCCGGGGGTTCGTGGAGAACTCCTACCTGGCCGGCCTCACCCCCACCGAGTTC 1437 Query 509096 TTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAG 509155 || | ||| || ||||| |||||||| ||| ||||||| |||||||||||||||||| Sbjct 1438 TTCTTCCACGCCATGGGCGGCCGCGAGGGGCTCATCGACACCGCCGTCAAGACGGCCGAG 1497 Query 509156 ACGGG 509160 || || Sbjct 1498 ACCGG 1502 >seq46538 Length=1674 Score = 89.7 bits (98), Expect = 6e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 |||||||||||| ||||| ||||||||||| |||| ||| | |||||| ||||| Sbjct 772 CGTCATCTCCTTCGACGGTTCCTACGTCAACTACCGTCACCTGGCGCTGCTGTGTGACAC 831 Query 512110 CATGTGCTGCCGCGGATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGC 512161 |||| || |||||| || ||||| |||| ||||||||| |||||||| Sbjct 832 CATGACCTCCCGCGGGCACCTGATGGCCATCACCCGCCACGGCGTCAACCGC 883 >seq144806 Length=279 Score = 86.0 bits (94), Expect = 8e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 507105 AGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACT 507164 ||||| | ||||| ||||| || || | || ||||| |||||||||||| || | | Sbjct 223 AGCGGCTGAAGGGGAAGGAAGGGCGGGTGCGGGGCAACCTCATGGGCAAGCGGGTGGATT 164 Query 507165 TTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGC 507224 | | |||||| ||||||||| |||||||||| | | | ||| ||| |||| ||||| | Sbjct 163 TCTCGGCGCGCACCGTCATCACCCCCGACCCCAACCTGGCCATCGACCAGGTAGGCGTCC 104 Query 507225 CC 507226 || Sbjct 103 CC 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6085280122777388