Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq263127 291 6e-73
seq9782 111 1e-18
seq17065 89.7 4e-12
seq3277 87.8 1e-11
>seq263127
Length=2033
Score = 291 bits (322), Expect = 6e-73
Identities = 957/1470 (65%), Gaps = 22/1470 (1%)
Strand=Plus/Plus
Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476
||||| | |||| ||||| || || ||||||||||| | ||||| || || |||||
Sbjct 511 TTATCTACAGCAGAAACATTGAGGATGCCATTGGCATCGATGTCAAAAGTAACCTCAATC 570
Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536
||||||||||| | | || || ||||| ||| | | || |||| || ||
Sbjct 571 TGAGGGACCCCACGGGGTGCTGGAGGGATGCCTGTGAGCTCGAACTTTCCAAGCAGGTTG 630
Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATT 281595
|| || || || | | |||||| || | | || || |||| | ||| || ||
Sbjct 631 TTGTCCTTGGTCATGGCCCTTTCACCTTCATACACCTGAATGAGTA-CACCAGGCTGGTT 689
Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 281654
|| || || || || || | |||| | | || || || || || || | | |
Sbjct 690 GTCAGAGTAGGTGGTGAA-AGTCTGTGTCTGCTTGGTGGGGATGGTGGTATTGCGCTTGA 748
Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714
| | ||||| | || ||||| ||||| | |||||| ||||||||||||||||| |
Sbjct 749 TGAGGACAGTCATGACTCCGCCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCA 808
Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774
|| | | || |||| || ||| | | ||| ||||| ||||| || | ||
Sbjct 809 AGAGCAGCAAATCCTGAACGTTCTCAGACTTGTCTCCAGATAGAATGGCTGCCTGGACAG 868
Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834
| |||||||| |||||||||||||| || |||| | | || || | ||| |||||||
Sbjct 869 CTGCACCATAGGCAACAGCTTCATCGGGGTTAATGCTCTTGTTCAGCTCTTTTCCATTGA 928
Query 281835 AAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACA 281893
| || | | ||||||| ||| | ||| || || | | || || || || || |||
Sbjct 929 AGAAGTCTTGCAGAAGTT-TCTGAATCTTGGGGATTCTGGTAGAACCACCCACCAAGACA 987
Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953
|| ||||| | |||||| || ||||| || | ||| | | || || || || ||
Sbjct 988 ATATCATGGATCTGTGACTTGTCCAGCTTGGCATCTCGAAGGGCCTTCTCTACAGGGTCC 1047
Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 282013
|| | | |||| ||| | | | || || ||| ||| | |||| | | |
Sbjct 1048 AGTGTGCCACGGAACAGGTCAGCATTCAACTCCTCAAATCGAGCCCGGGTAATGGAGGTA 1107
Query 282014 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073
| | |||||||| || | | |||||||| ||||| | | || || || ||
Sbjct 1108 TAGAAGTCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAG 1167
Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTGA 282129
|| | || || || || || || || || | || | || | ||| | | || |
Sbjct 1168 AGGGTGCGCTTGGCCCGCTCGCAGGCCGTGCGGAGACGGCGGACAGCTCTCTTGTTCTCA 1227
Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGAC 282188
|||| ||| | || | |||| |||||| || ||| | | || | || | |
Sbjct 1228 CTGATG----TCTTTCTTGTGCTTTCGCTTGAACTCAGCAATGAAATGAT-TGACCATTC 1282
Query 282189 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 282248
| || ||||||||||| || || || | || | ||| | || | | | || | ||||
Sbjct 1283 GGTTGTCAAAATCTTCTCCACCTAAGTGGGTGTCTCCAGCTGTTGATTTGACCTCAAAAA 1342
Query 282249 GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAA 282308
|||||| |||| || | | | |||||| || ||||| |||| |||||||| |
Sbjct 1343 TTCCATCCTCAATAGTGAGGATTGACACATCAAAAGTGCCACCTCCCAAGTCAAAAATGA 1402
Query 282309 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368
| |||||| |||| | || ||||| | ||||| |||| ||||||||||||||
Sbjct 1403 GCACATTCCTTTCAGCTCCGACCTTCTTATCTAAGCCATAAGCAATAGCAGCAGCAGTTG 1462
Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428
||||||| || |||| | ||||| || |||||||| |||| |||||||| || || |
Sbjct 1463 GTTCATTGATGATTCGAAGTACATTGAGGCCAGCAATAGTTCCAGCATCTTTTGTTGCCT 1522
Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488
||| || || || || || || || || || || | || || | || || ||||
Sbjct 1523 GTCGCTGAGAGTCATTGAAGTAAGCGGGCACTGTGACCACAGCGTTGGTAACAGTCTTTC 1582
Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548
| | || || ||| ||| ||||| || | | || ||| || || | || ||||
Sbjct 1583 CGAGGTACGCTTCTGCAATTTCCTTCATCTTTGTCAGAACCATGGAGGACACTTCCTCTG 1642
Query 282549 G--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 282606
| |||| | | ||| | | |||| ||| |||| | | || | || |
Sbjct 1643 GGTAGAA-ACTTTTTGTCTCCCCTTTG-TATTCCACTTGGACCTTGGGCCTGCCTGCATC 1700
Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 282666
||| | || | || ||||| | |||||||| || |||||| |||| |||
Sbjct 1701 ATTCACCACCATGAAGGGCCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCT 1760
Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726
| || || | ||||| |||||||||| || ||||| || || | |||| | ||||
Sbjct 1761 ACGCCCGATCAGACGTTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATT 1820
Query 282727 TTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTG 282785
||||| ||||| ||||| | || | ||||| || || || | |||||| ||| || |
Sbjct 1821 CTTGGCCGCATCCCCAATTA-ATCTCTCTGTGTCCGTGAAAGCAACATAGCTTGGTGTGG 1879
Query 282786 TGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACAC 282845
|||| ||||| || ||||| ||||||||||| || || |||| || | ||||| ||||
Sbjct 1880 TGCGGTTACCCTGGTCATTGGCAATAATTTCCACCTTTCCATGCTGGAAGACACCCACAC 1939
Query 282846 AACTAAAAGTTGTTCCTAAATCAATACCAA 282875
| | || || || | |||||| ||||
Sbjct 1940 AGGAGTAGGTGGTGCCGAGATCAATGCCAA 1969
>seq9782
Length=92745
Score = 111 bits (122), Expect = 1e-18
Identities = 279/418 (67%), Gaps = 6/418 (1%)
Strand=Plus/Plus
Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483
||||| | || || || |||||||||||||| | ||||| ||||| || || || ||||
Sbjct 38179 CGGCACTGACGTTCAGGATACCATTGGCATCTATGTCAAAAGTGACCTCGATCTGGGGGA 38238
Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543
| || | | || || ||||| ||| | | |||| | ||||| || || || |
Sbjct 38239 CTCCACGGGGTGCCGGGGGGATGCCTGTTAGGTCAAATTTGCCCAGCAAGTTGTTGTCCT 38298
Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAA-CTACAGTTTGATTATCTGA 281601
| || | | ||||||||| | | |||| || | || | | || || |||||
Sbjct 38299 TCGTCATAGCCCTCTCACCCTCGTACACCTGGACCAGGACGCTGC--TCTGGTTGTCTGA 38356
Query 281602 ATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATAT 281660
|| || || || |||| ||| ||| |||||| || ||||| | | || | |
Sbjct 38357 GTAGGTGGTGAAGG-TCTGAGTTTGTTTGGTAGGAATGGTGGTGTTACGCTTGATGAGAG 38415
Query 281661 TGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 281720
||||| | ||||| ||||| || | || || || ||||| |||||||| | || |
Sbjct 38416 CAGTCATCACTCCACCGGCTGTCTCGATGCCCAGGGACAGAGGGGTGACATCCAACAGCA 38475
Query 281721 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780
| || || | || ||| | | || | || ||||||||||| | ||||||||
Sbjct 38476 GCAGATCCTGCACGTTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCAC 38535
Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838
| || |||||||| ||||||||||| | | | || || | ||| |||||||| ||
Sbjct 38536 CGTAAGCAACAGCCTCATCAGGATTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAA 38593
>seq17065
Length=79502
Score = 89.7 bits (98), Expect = 4e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131180 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 131239
|| || ||| | || || || ||||| || || ||| | ||| | | | |||||||||
Sbjct 53578 GTGGCTACAGTGGCGTTCGGAATGGGCATCAACAAAGCAGATATCCGGATGGTTATTCAT 53519
Query 131240 TACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 131299
||||| || || ||| | || ||| ||||||||||||||||| ||||| |||||||||
Sbjct 53518 TACGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCGTGAT 53459
Query 131300 GG 131301
||
Sbjct 53458 GG 53457
>seq3277
Length=206865
Score = 87.8 bits (96), Expect = 1e-11
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427
|| |||||||||||||||| ||||| | ||||||||| | || |||||||| || ||
Sbjct 52133 GGCTCATTAATAATTCTCATCACATTCAACCCAGCAATTGTCCCAGCATCTTTTGTAGCC 52074
Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473
|| | || | ||||||||| || || || ||||||| ||| ||||
Sbjct 52073 TGACGCTGAGCATCGTTAAAGTAGGCTGGCACAGTAACAACAGCAT 52028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3727553053254264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |