Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq12144 147 2e-30
seq109229 132 5e-26
seq21304 127 2e-24
seq9972 96.9 3e-15
>seq12144
Length=38566
Score = 147 bits (162), Expect = 2e-30
Identities = 157/205 (77%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || ||||| ||| || ||| | | | || || ||||
Sbjct 430 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCT 372
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || |||| |||||| ||||| || |||||||||||||| |||||
Sbjct 371 GCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCT 312
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||| | | ||||| ||||| ||||||| || |||| ||||| ||| |||||||
Sbjct 311 TTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGG 252
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || ||||| || ||||||||
Sbjct 251 TCAGGGTCTTTACAAAGATCTGCAT 227
Score = 140 bits (154), Expect = 3e-28
Identities = 156/206 (76%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || |||||||| | || ||| | || || ||||
Sbjct 1114 ATGGAGGGTGGATTCCTTCTGGATGTTGTAATCTGAGAGGGTACGACCA-TCTTCCAGCT 1056
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || |||| |||||| ||||| || |||||||||||||| |||||
Sbjct 1055 GCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCT 996
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||| | | ||||| ||||| ||||||| || || | ||||| ||| |||||||
Sbjct 995 TTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCGG 936
Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661
||| || || ||||| |||||||||
Sbjct 935 TCAAGGTCTTCACGAAGATCTGCATG 910
Score = 132 bits (146), Expect = 5e-26
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || ||||| ||| || ||| | | | || || ||||
Sbjct 658 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCT 600
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || |||| |||||| ||||| || |||||||||||||| |||||
Sbjct 599 GCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCT 540
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||| | | ||||| ||||| ||||||| || || | ||||| ||| || ||||
Sbjct 539 TTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACCGG 480
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || || ||||||||
Sbjct 479 TCAAGGTCTTCACAAAGATCTGCAT 455
Score = 131 bits (144), Expect = 2e-25
Identities = 154/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || ||||| || || ||| | | | || || ||||
Sbjct 886 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCA-TCTTCCAGCT 828
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || |||| |||||| ||||| || || ||||||||||| |||||
Sbjct 827 GCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATACCTTCCTTGTCCTGGATCT 768
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| || | | ||||| ||||| ||||||| || |||| ||||| ||||||||| |
Sbjct 767 TCGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCAG 708
Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661
|||| || || || || |||||||||
Sbjct 707 TCAGGGTCTTCACAAAGATCTGCATG 682
Score = 129 bits (142), Expect = 6e-25
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| || ||||| ||| || ||| | | | || || |||||||||||
Sbjct 1335 GTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCTGCTTGCC 1277
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| |||||| ||||| || |||||||||||||| ||||||| |||
Sbjct 1276 GGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTT 1217
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| ||||| ||||||| || |||| ||||| ||| || |||||||| ||
Sbjct 1216 CACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGT 1157
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 1156 CTTCACAAAGATCTGCAT 1139
>seq109229
Length=213
Score = 132 bits (146), Expect = 5e-26
Identities = 145/190 (76%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| ||| || ||| | | | ||||| ||||| ||||||||| | ||
Sbjct 213 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCCAGCTGTTTGCCCGCGAATAT 155
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|||| ||||||||| || ||||||||||||||||| |||||| ||||| | |||
Sbjct 154 CAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTC 95
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| ||||| ||||||| || || | |||| ||| ||||| ||||| || || |||||
Sbjct 94 GATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 35
Query 133652 AATCTGCATG 133661
|||||||||
Sbjct 34 GATCTGCATG 25
>seq21304
Length=31350
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| ||| | ||| | ||| || |||||||||||
Sbjct 158 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCTTCCAGCTGCTTGCCA 217
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || |||| |||||| || || || ||||| |||||||| |||||| ||||
Sbjct 218 GCAAAGATCAGCCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 277
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||||| ||||| ||||||| || || | ||||| ||| ||||| ||||| ||
Sbjct 278 ACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 337
Query 133644 TTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 338 TTCACAAAGATCTGCATG 355
Score = 125 bits (138), Expect = 7e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| || || ||| | || || |||||||||||
Sbjct 386 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 445
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || |||| |||||| || || || |||||||||||||| |||||| ||||
Sbjct 446 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 505
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||||| ||||| ||||||| || || | ||||| ||| ||||| ||||| ||
Sbjct 506 ACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 565
Query 133644 TTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 566 TTCACAAAGATCTGCAT 582
>seq9972
Length=29549
Score = 96.9 bits (106), Expect = 3e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
||||| || || || | |||||||||||||||||||| |||| ||||| ||||||
Sbjct 11951 TACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 11892
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||||| | |||||| | ||| |||||||||||||||||
Sbjct 11891 CTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGG 11854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481811226275360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |