Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq1256 152 6e-32
seq2341 120 4e-22
>seq1256
Length=1756643
Score = 152 bits (168), Expect = 6e-32
Identities = 581/903 (64%), Gaps = 22/903 (2%)
Strand=Plus/Minus
Query 162160 ATCCAATTAAGATCCCCCGATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCAC 162219
||||| || || || || || || || || || || || || || || || |||||
Sbjct 255099 ATCCAGTTCAGGTCTCCTACCCCAAAAACACAGACAGAGCGAACATGAACTCCACTGCAT 255040
Query 162220 GGCGGATACAGGGCCCCATCGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTA 162279
|| || || | || || | | ||| || || || |||| |||||||| || |||||
Sbjct 255039 GGTGGGTAAGGTGCACCCTTGGACACGTCACCTTCAAAGTACTGCCACTTGACAAACCTG 254980
Query 162280 GTGATAGCCTGCATGTCGGAGGTGTCGTACTTGTACACT-GACGGCACGGCTCCAGGAAC 162338
| | || | |||||| || || ||||||| |||| || | ||| || || || ||
Sbjct 254979 GCCAGTGCATTCATGTCAGAAACATCATACTTGT-CACTAGAAGACACTGCACCTGGGAC 254921
Query 162339 ACCCGGCAGTCTCTGTAGAGTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGA 162398
| || | |||||| | || ||||| | || ||| ||||| || || || || || |
Sbjct 254920 TTCAGGGATTCTCTGAATTGTTGCCCATAAGTATTCATCTGGGCTGTAAGTATCTTTTGC 254861
Query 162399 CCACTCCATGAACTCCCTGACCGTTTTATCGTATAG-AAT--GTAAGAGACGTAGGACCT 162455
|||||| || |||| | || |||| | | | ||| ||| || | ||
Sbjct 254860 CCACTCAATTAACT---TAACTATTTTGCTGCTTTGTAATACGTATTCTACAAATCTTCT 254804
Query 162456 GGTCACAATAAAGTACGCGCTACCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTT 162515
| | || ||||| || || ||||||||||| | || | | | ||| || ||| |||
Sbjct 254803 GCTAACTATAAAATAGGCACTACCAGAAAAAATTGGAGTACTGAGAGGTGGTAGCTGTTT 254744
Query 162516 GTCTTGACCCGTGTTGACTACCATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGC 162575
|||| || ||||| || | || || | | | | || || ||||||| |
Sbjct 254743 GTCTATGCCTGTGTTTTTTATTTTACCATCAATAATCTCATGGTGTTTTTTCCACCTTAC 254684
Query 162576 CATCTTACTGGTAGACGGG----TGTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCT 162631
||| || || || | ||| || || | ||||| ||| | ||| |
Sbjct 254683 TTCTTTA----TAAACAGGCATTTTTTCCGTTTCCAAGCTGTTTTCACCTTTAAGGGCTT 254628
Query 162632 TCAGCTGACGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAA 162691
| | | || || || | |||||||| | |||||||| |||| ||||| || |
Sbjct 254627 TTAATTTCTCTACTATTTCCTGGTTGGTCTTTATAGGAAAGTCCATGCCACAGAGGTTTA 254568
Query 162692 TAACATATTTCCACTTAACGCTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCT 162751
| | |||||||| || || || || ||||| | | ||||| | || ||||
Sbjct 254567 TCAGGTATTTCCAGTTTGAACTTCTTCTGTGGAGATCTTTCATGCAGTTAATGTCTGCCT 254508
Query 162752 GGACGCGACTCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGT 162811
| || || ||||| || || || || || ||||| ||| ||| | ||||||||| |
Sbjct 254507 GCACCCGGCTCCAGGAAGCATATACAACACTCTCTAACTGGCTGGAAATAAAGACATTAT 254448
Query 162812 CGAAACACGAAACTATCCCCATCACGGCCAGTGAGAACA---TCGGGTCCGCTTTCCTAT 162868
| ||||| || ||||| ||| |||| || || | || | || || ||| | |
Sbjct 254447 CAAAACATGAGACTATTCCCTTCACAGC-AGCAAAAAAAGATTCTGGAGACTTTT--TGT 254391
Query 162869 CTACGTGTACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACA 162928
| || || | |||||| | |||||||||||| ||||| | || || | ||| || | ||
Sbjct 254390 CAACATGAATGCAGTAAAAATTCTGAGGGGCATAGATTGATCTTAGAAGTCTATCAAGCA 254331
Query 162929 TCTCTATCTTATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGAC 162988
|||| || || || | ||||| || ||||| || || || || || || || || |
Sbjct 254330 TCTCAATTTTGTGATAAACCACTATGGAATAAGCAATTGGAAATTCTGCTTCTTCATTGC 254271
Query 162989 TGAGAGACCCTGTAAAGTACTTGCGGTCCCTCACAAACGCCGCACAGTCCTCCGTCATGT 163048
|||||| | | ||| ||| || | | | | || | |||||||| | |||||||
Sbjct 254270 TGAGAGGCTCCATAATGTATTTTCTGGTCTTGGTGAAGGAGGCACAGTCTGCTGTCATGT 254211
Query 163049 TAA 163051
|||
Sbjct 254210 TAA 254208
>seq2341
Length=450988
Score = 120 bits (132), Expect = 4e-22
Identities = 258/380 (68%), Gaps = 12/380 (3%)
Strand=Plus/Minus
Query 162610 CTGTTACGACCCCCCAAGGCCTTCAGCTGACGC--ACCATCTCTAGATTGGTCTTAAGGG 162667
||||| || |||| || |||||||| | ||| || ||||| |||||||| | ||
Sbjct 176908 CTGTTCCGGCCCCGCAGCGCCTTCAG--GGCGCTGACTATCTCAGCGTTGGTCTTGATGG 176851
Query 162668 GAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGTA-CAGA 162726
| || |||||||||||| || | | ||| | ||| | | | || | | |||
Sbjct 176850 GGAAATCGGTGCCGCAGGTGTTGAGGAGATAGTGCCATGGCATGGGGC-TCTGCAACAGG 176792
Query 162727 TCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCTCC 162786
||||| | ||||| || || ||||| | || ||| || || || || || | |||
Sbjct 176791 TCCTGCATGCAGTTGAGGTCTGCCTGCAGCCGGGACCAGGAGGCATAGACCACCTTTTCC 176732
Query 162787 AACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTGAG 162846
| | | || ||||||| |||| ||| || | || || || ||||||| |
Sbjct 176731 AGGCGGCTAGCCACAAAGATATTGGGGAAGCAGGCTACGATGGCCCGCACGGCCTCCTGG 176672
Query 162847 AACAT---CGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTAG 162903
|| || |||| | ||||| || ||||| | |||||| | ||||| |||| ||||
Sbjct 176671 AAGATAGCCGGGGAC---TTCCTGTCAACGTGGATGCAGTAGACGTTCTGGGGGGTGTAG 176615
Query 162904 ATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGCT 162963
| || |||||| | | |||||||||||| || || | ||| | || || || || ||
Sbjct 176614 AGGGACCTCAGGAGCCGCTCGAACATCTCGATGTTGTTGTGGATGACCATGGAGTAGGCA 176555
Query 162964 ATGGGGAACTCAGCCTCCTC 162983
||||||||||| ||||||||
Sbjct 176554 ATGGGGAACTCTGCCTCCTC 176535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576506081734400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |