Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq89524 123 8e-25
seq89407 123 8e-25
seq29493 123 8e-25
seq10945 116 1e-22
seq15336 114 4e-22
seq25046 113 1e-21
seq12957 113 1e-21
seq84673 98.7 3e-17
seq21304 98.7 3e-17
seq1974 98.7 3e-17
seq1445 98.7 3e-17
seq342 91.5 5e-15
>seq89524
Length=1477
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 424 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAA 483
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 484 CCCGGGCTTCAGC 496
>seq89407
Length=2273
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1766 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAA 1707
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 1706 CCCGGGCTTCAGC 1694
>seq29493
Length=17891
Score = 123 bits (136), Expect = 8e-25
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 10743 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAA 10684
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 10683 CCCGGGCTTCAGC 10671
>seq10945
Length=68598
Score = 116 bits (128), Expect = 1e-22
Identities = 69/72 (96%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 64741 GCTGGAGTAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 64682
Query 2829 CCGGGCTTCAGC 2840
||||||||||||
Sbjct 64681 CCGGGCTTCAGC 64670
>seq15336
Length=175689
Score = 114 bits (126), Expect = 4e-22
Identities = 69/73 (95%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 135760 GGCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 135701
Query 2828 CCCGGGCTTCAGC 2840
|||||||||||||
Sbjct 135700 CCCGGGCTTCAGC 135688
>seq25046
Length=22505
Score = 113 bits (124), Expect = 1e-21
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823
||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 7462 TTAGGGCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTT 7403
Query 2824 CAACCCCGGGCTTCAGC 2840
||| ||| |||||||||
Sbjct 7402 CAATCCCAGGCTTCAGC 7386
Score = 104 bits (114), Expect = 7e-19
Identities = 65/70 (93%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 2771 TGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830
|| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 7360 TGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATCCC 7301
Query 2831 GGGCTTCAGC 2840
|||||||||
Sbjct 7300 AGGCTTCAGC 7291
>seq12957
Length=24753
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 6730 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 6671
Query 2829 CCGGGCTTCAGC 2840
||||||||||||
Sbjct 6670 CCGGGCTTCAGC 6659
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 12161 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 12102
Query 2829 CCGGGCTTCAGC 2840
||||||||||||
Sbjct 12101 CCGGGCTTCAGC 12090
>seq84673
Length=1170
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 704 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 763
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 764 CCGGGTTTCGGC 775
>seq21304
Length=31350
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 5344 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5285
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 5284 CCGGGTTTCGGC 5273
>seq1974
Length=93044
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 56512 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 56571
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 56572 CCGGGTTTCGGC 56583
>seq1445
Length=459653
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 313103 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 313044
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 313043 CCGGGTTTCGGC 313032
>seq342
Length=471314
Score = 91.5 bits (100), Expect = 5e-15
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||||| |||||||||| ||||||| |||||||||||||||||| ||||| || |||| |
Sbjct 29808 GGCTGGAGTAGCTCAGCCGGGAGAGGATTAGACTGAAGATCTAACGGTCCTTGCTTCAGC 29867
Query 2828 CCCGGGCTTCAGC 2840
||||| |||||||
Sbjct 29868 CCCGGCCTTCAGC 29880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15803424468780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |