Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq12144 82.4 7e-11
>seq12144
Length=38566
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/216 (69%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | |||||||| || | ||||| || | ||||| |||| ||||| |
Sbjct 223 CAAGATGCAGATCTTTGTAAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCC 282
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| || || || ||| | || || ||| || || || || || || || |||||
Sbjct 283 CAGTGACACCATTGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCCGA 342
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGAT 25348
|||||| || || || | | |||||| || || ||||||| | | |||| |||
Sbjct 343 TCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTC--CGAC 400
Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384
||||| || || || ||||||||| | ||| | |||
Sbjct 401 TACAACATCCAGAAGGAATCCACCCTCCATCTTGTG 436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 443612435940480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |