Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq189893 143 2e-29
seq21304 136 4e-27
seq12144 129 5e-25
>seq189893
Length=523
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| || | |||||||||| ||| | || |||||||||||||||||| || | |
Sbjct 267 CCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 326
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || |||||||||||||| ||||| |||| || |||||| || | ||||
Sbjct 327 AAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 386
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| |||||| ||| | | || | | ||||| | ||| |||
Sbjct 387 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACC 446
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | |||||| ||||| ||||| | || |||||||| ||||||||
Sbjct 447 TCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 493
>seq21304
Length=31350
Score = 136 bits (150), Expect = 4e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| ||||| ||| | || |||||| || |||||||| |||| | ||| ||| ||||
Sbjct 142 CAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTC 201
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
||||||||||| || ||||| |||| || |||||| || | |||| || |||||||||
Sbjct 202 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGCGGAATGCCCTCCTTGTC 261
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| |||||| ||| | | | | | ||||| || | || ||||||| ||||| ||
Sbjct 262 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 321
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| ||||||| || |||||||| ||||||||
Sbjct 322 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 354
Score = 129 bits (142), Expect = 5e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| ||||| ||| | || |||||| || |||||||| || | || ||| ||| | ||
Sbjct 370 CAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 429
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
||||||||||| || ||||| |||| || |||||| || | |||| || ||||||||
Sbjct 430 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 489
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| |||||| ||| | | | | | ||||| || | || ||||||| ||||| ||
Sbjct 490 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 549
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| ||||||| || |||||||| |||||||||
Sbjct 550 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCATT 583
>seq12144
Length=38566
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || ||| || | || ||||||||||| || || ||
Sbjct 645 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 586
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| ||||||| ||||| | |
Sbjct 585 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 526
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || ||||| ||||| || ||||||
Sbjct 525 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACCGGTCAAGGTCTTCACA 466
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 465 AAGATCTGCAT 455
Score = 129 bits (142), Expect = 5e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || ||| || | || ||||||||||| || |||||
Sbjct 1329 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 1270
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| ||||||| ||||| | |
Sbjct 1269 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 1210
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || ||||| |||| || ||||||
Sbjct 1209 TCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACA 1150
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 1149 AAGATCTGCAT 1139
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| || ||| || | || ||||||||||| || |||||
Sbjct 417 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 358
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| ||||||| ||||| | |
Sbjct 357 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 298
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || |||| || || |||
Sbjct 297 TCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACA 238
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 237 AAGATCTGCAT 227
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || ||||||||||| | | ||| || | || ||||||||||| || || ||
Sbjct 1101 TCCTTCTGGATGTTGTAATCTGAGAGGGTACGACCATCTTCCAGCTGCTTGCCAGCGAAG 1042
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || ||||||||| ||||||| ||||| | |
Sbjct 1041 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 982
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| || || || ||||| || |||||
Sbjct 981 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACG 922
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 921 AAGATCTGCAT 911
Score = 102 bits (112), Expect = 7e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | || ||| || | || ||||||||||| || || ||
Sbjct 873 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 814
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| | ||||||||| |||||| |||| |
Sbjct 813 ATCAGCCTCTGCTGATCGGGGGGAATACCTTCCTTGTCCTGGATCTTCGCTTTCACGTTC 754
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||| | ||||| ||||| || |||| || ||||||
Sbjct 753 TCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACA 694
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 693 AAGATCTGCAT 683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449292660169120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |