Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq6632 111 1e-19
seq114383 89.7 4e-13
>seq6632
Length=32526
Score = 111 bits (122), Expect = 1e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972
|||||||| ||| | |||| || || ||||| ||||| || || |||||||| ||||||
Sbjct 7484 CAAGAAGTACAAATCACAGAGGCTCGGTGTTTCTATGGCTTCCAGATTGCCATGGAAAAT 7543
Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAG 44032
|| ||||| ||||||||||||||||| || || || ||||| |||||| | |||| |
Sbjct 7544 ATACATTCAGAAATGTACAGTCTTCTCATTGACACCTACATTAAAGATTCTAAAGAGAGG 7603
Query 44033 CATCGATTGTTTAATG 44048
| ||||||| |||
Sbjct 7604 TTTGTATTGTTTGATG 7619
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
|||||||| |||| || ||||||| |||||||| ||||||||||| || || |||||
Sbjct 9559 GGAGAACGTGTTGTAGCTTTTGCAGCAGTGGAAGGAATTTTCTTTTCTGGCTCTTTTGCA 9618
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
| || |||||| | |||||| |||| || |||||||| | || ||||| ||||| |
Sbjct 9619 TCAATTTTTTGGCTGAAGAAAAGAGGATTAATGCCTGGACTCACTTTTTCTAATGAACTT 9678
Query 44243 ATAAGTCGTGATGA 44256
|| ||| | |||||
Sbjct 9679 ATCAGTAGAGATGA 9692
>seq114383
Length=219
Score = 89.7 bits (98), Expect = 4e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 44489 GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTT 44548
||| |||| |||||||| || ||||||||||| || | ||||| || |||||||| |||
Sbjct 8 GTAGAAAATCCGTTTGACTTCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTT 67
Query 44549 GAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
|| || || || || || |||||| | ||||| ||||||
Sbjct 68 GAGAAGCGAGTAGGCGAGTATCAGAGGATGGGAGTCATG 106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396165734115820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |