Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq2341 212 8e-50
seq7893 150 2e-31
seq173100 122 1e-22
>seq2341
Length=450988
Score = 212 bits (234), Expect = 8e-50
Identities = 657/999 (66%), Gaps = 36/999 (4%)
Strand=Plus/Plus
Query 13611 TACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGACAGGGGGTATCTCGT-GAG 13669
||| ||||||||||| |||||| | |||| || || | | || | || | |||
Sbjct 176463 TACCTGAACATGACGAAGGACTGCAGGAGCTTC---AAGGAGACGCGGCAGTTCATCGAG 176519
Query 13670 GCCCC--TGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCAC 13727
||| |||||| ||| |||| ||||| ||||| |||||||| || || |||||| ||
Sbjct 176520 TTCCCACTGAGCCAGGAGGAGGCAGAGTTCCCCATTGCCTACTCCATGGTCATCCACAAC 176579
Query 13728 AAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGC 13787
|| ||||||||||||||||| ||||||||| || ||||| |||| |||||| ||||||||
Sbjct 176580 AACATCGAGATGTTCGAGCGGCTCCTGAGGTCCCTCTACACCCCCCAGAACGTCTACTGC 176639
Query 13788 GTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCC---GGGGCGTCTCGGCCATCGCC 13844
||||||| ||| |||||| || | | || ||| || ||| ||||||||
Sbjct 176640 ATCCACGTTGACAGGAAGTCC-CCGGCTA--TCTTCCAGGAGGCCGTGCGGGCCATCGTA 176696
Query 13845 AGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGG 13904
|||||||| || | |||| ||| ||| | | ||||| || | |||||||
Sbjct 176697 GCCTGCTTCCCCAATATCTTTGTGGCTAGCCGCCTGGAAAAGGTGGTCTATGCCTCCTGG 176756
Query 13905 AGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGT 13962
|| ||||||| ||||||| ||||||| ||||||| | | ||| | || |
Sbjct 176757 TCCCGGCTGCAGGCAGACCTCAACTGCATGCAGGACCTGTTGCAGAGCCCCATGCCA--T 176814
Query 13963 GGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCG 14022
|| || || |||||| ||||| | || ||||| ||||||||||| ||||| |
Sbjct 176815 GGCACTATCTCCTCAACACCTGCGGCACCGATTTCCCCATCAAGACCAACGCTGAGATAG 176874
Query 14023 TGCGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAA 14080
| | || |||||||| ||| | ||| |||| | ||||| || || | | | | |
Sbjct 176875 TCAGCGCCCTGAAGGCGCTGCGGGGCCGGAACAGCATGGAGTCAGAGAAGCCCT--CGGA 176932
Query 14081 CCACAAGC-TGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCA 14139
| ||||| |||| ||| | | ||| | |||| ||| | | | |
Sbjct 176933 CTCCAAGCGGGCACGCTGGCAGTATCA-CCACATAGTGG-----GGCAG-TTCATCTCCC 176985
Query 14140 ACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTT 14199
|| | || | || ||||| || | || |||||| || |||| || || |
Sbjct 176986 GGACAGCCACAGAGAAACTGCCGCCACCCCACAACTCCCCCATGTTCACGGGCAATGCGT 177045
Query 14200 ACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC 14259
|| | || ||||| |||| |||||| | | | || | || || || | ||||
Sbjct 177046 ACATCGCAGTCACACGGGCCTTCGTGCAGTACATCTTTGAGAAC---CCCACAACACTGC 177102
Query 14260 ---TCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGC 14316
|| | | ||| | ||||||| |||||||| ||||||||| | ||||||||| |
Sbjct 177103 AGTTCTTTGAGTGGGCCAAGGACACCTACAGCCCTGACGAGCACATCTGGGCCACCCTCA 177162
Query 14317 AGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACA 14376
| | ||| || ||| || | ||| | | ||||| | | |||||| |
Sbjct 177163 ACCGCATGCCTGGCGTGCCAGGCTCCCTGCCCCAGAATGACAAGTTCCAGCTCTCGGATA 177222
Query 14377 TGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGG 14436
|| ||| | | | ||||||||||| ||| ||||| || || || || |
Sbjct 177223 TGAACGCCCTACCCCGCCTGGTCAAGTGGCAGTACCTGGAGGGCGACCCCAGCAAGGGCG 177282
Query 14437 CCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCG 14496
| | |||||||| ||| |||| ||| | | || ||||||||| |||| ||||
Sbjct 177283 CGCCCTACCCGCCCTGCACCGGCCAGCACCAGCGCTCCGTCTGCATCTACGGGGTGGGCG 177342
Query 14497 ACGTGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACG 14555
||||| ||| || ||| | | ||||| || ||||||||||||||| || | |
Sbjct 177343 ACGTGCCCTGGATGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGACCCCGTGGTG 177401
Query 14556 GACGAGTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594
||||| |||| | | || ||||| ||| || |||||
Sbjct 177402 GACGACGCCGCCATCCTGTGCCTGGAGGAGTACCTGCGC 177440
>seq7893
Length=49144
Score = 150 bits (166), Expect = 2e-31
Identities = 440/662 (66%), Gaps = 43/662 (6%)
Strand=Plus/Minus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| || |||| || |||| || || ||| | |||||| ||| ||| || ||||||
Sbjct 18991 CCTCTCAGCC--GAGGAGGCCGCCTTCCCCGTTGCCTAC---ATCATGACCCTGCACAAG 18937
Query 13731 A---TCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGC 13787
| |||| |||||||| ||| | ||||| | ||| || || ||| ||||||||
Sbjct 18936 GAGTTTGAGACCTTCGAGCGGCTCTTCAGGGCAGTGTACATGCCCCAAAACATCTACTGC 18877
Query 13788 GTCCACGTGGACTCCAAGTC--CGGCGACGAGTTCATCCGG--GGCGTCTCGGC-CATCG 13842
|||| |||||| ||||| | |||| | | ||||| |||| |||| | | |
Sbjct 18876 ATCCATGTGGACACCAAGGCACCGGCCCC-----CTTCCGGCAGGCGGTGCGGCGCCTGG 18822
Query 13843 CCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCT 13902
| |||||||| |||| ||| ||| |||| | | ||||| |||||| |
Sbjct 18821 TGGGCTGCTTCCCCAACGCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTACGGCGGCG 18762
Query 13903 GGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGT 13962
||| ||| |||||||||| ||||||| |||||| ||||| |||| |
Sbjct 18761 CCTCCCGCCTGCGGGCCGACCTCCACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCT 18702
Query 13963 GGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCG 14022
|| | |||||||||||| ||||| ||||||||| | |||||||||| ||||||||
Sbjct 18701 GGCGCTACCTGCTCAACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATCG 18642
Query 14023 TGCGGGCGCTGAAGGCCCTGGGCGGCAAGAAC----GCCCTGGAGAGCGAGGGCATGCCC 14078
| | | ||| |||| | | || || |||||| ||| || | || | || |||
Sbjct 18641 TCCAGCTGCTCAAGGGCTTTGGGGGGAAGAACATCACCCCCGGGGTGC--TGCCA--CCC 18586
Query 14079 AACCACA-AGCTGCACCGCATCAGGAAGAGGCAC---GTGGTGGCCAG-----CGGCGGC 14129
||||| |||| ||||| | | |||| | || |||||| || |
Sbjct 18585 CCCCACATCACTGC-CCGCACAAAATATGTGCACAGGGAGGGGGCCAGGCACAATGCCTC 18527
Query 14130 GTGG-TGGTCAACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGC 14188
| || || ||| |||| || | ||||||| || ||||| | || || ||||||
Sbjct 18526 GGGGCTGATCACCACCTGCCTGCACAAGGCGCCCCCGCCCCACAACATGACCATCTACTT 18467
Query 14189 GGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGC- 14247
|| || ||| |||| ||||||||| |||||||| ||||| || ||||| | |
Sbjct 18466 TGGCTCTGCGTACATTGCCGTCACCCGGCCCTTCGTGGAGTTCGTGCTGCAGGACCAACG 18407
Query 14248 --CGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTG 14305
| | | ||||| ||| |||| ||||||||| |||||||| || |||||| | ||
Sbjct 18406 CGCCATCGATCTGCT--GGCA-TGGTCCGAGGACACCTACAGCCCTGATGAGCACTTCTG 18350
Query 14306 GG 14307
||
Sbjct 18349 GG 18348
>seq173100
Length=415
Score = 122 bits (134), Expect = 1e-22
Identities = 245/359 (68%), Gaps = 16/359 (4%)
Strand=Plus/Minus
Query 13704 GCCTACTCGATCGTGATCCACCACAAGA---TCGAGATGTTCGAGCGCCTCCTGAGGGCC 13760
|||||| ||| ||| || |||||| | |||| |||||||| ||| | |||||
Sbjct 413 GCCTAC---ATCATGACCCTGCACAAGGAGTTTGAGACCTTCGAGCGGCTCTTCAGGGCA 357
Query 13761 ATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC--CGGCGACGAGT 13818
| ||| || || ||| |||||||| |||| |||||| ||||| | |||| |
Sbjct 356 GTGTACATGCCCCAAAACATCTACTGCATCCATGTGGACACCAAGGCACCGGCCCC---- 301
Query 13819 TCATCCGG--GGCGTCTCGGC-CATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACC 13875
| ||||| |||| |||| | | | | |||||||| |||| ||| ||| ||
Sbjct 300 -CTTCCGGCAGGCGGTGCGGCGCCTGGTGGGCTGCTTCCCCAACGCCTTCCTCGCCTCCC 242
Query 13876 GGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGT 13935
|| | | ||||| |||||| | ||| ||| |||||||||| |||||||
Sbjct 241 GGGCGGAGCGGGTGGTCTACGGCGGCGCCTCCCGCCTGCGGGCCGACCTCCACTGCATGA 182
Query 13936 CGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACT 13995
|||||| ||||| |||| ||| | |||||||||||| ||||| |||||
Sbjct 181 GAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTCAACACCTGCGGCCAGGACT 122
Query 13996 TCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGCGGCAAGAAC 14054
|||| | |||||||||| ||||||||| | | ||| |||| | | || || ||||||
Sbjct 121 TCCCCTTGAAGACCAACCGGGAGATCGTCCAGCTGCTCAAGGGCTTTGGGGGGAAGAAC 63
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 656545894896640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |