Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq540 116 3e-21
seq3407 91.5 1e-13
>seq540
Length=81673
Score = 116 bits (128), Expect = 3e-21
Identities = 143/189 (76%), Gaps = 5/189 (3%)
Strand=Plus/Plus
Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282
||| || |||| |||||||| || |||||||||||||| || || || || |||| ||
Sbjct 26891 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGCCCCAAATC 26950
Query 30283 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341
||||| || || ||||| ||| ||| ||| |||| || || | || || || || |
Sbjct 26951 CCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCAT 27009
Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30401
|||| ||||| || ||||| ||||||||||||||| ||||| || || || || || |
Sbjct 27010 CCCAAATCTTCACACCCTTGGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 27067
Query 30402 ACAG-CAGC 30409
|||| ||||
Sbjct 27068 ACAGACAGC 27076
>seq3407
Length=547508
Score = 91.5 bits (100), Expect = 1e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| |||||||||||||| |||| || || |||||| | | ||| | |||||| || ||
Sbjct 433891 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 433832
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||||||||| || ||| |||||||||||| | ||||| || |||
Sbjct 433831 ATGGAGAACCAGGTTTTTTTACCCATTATCAGGGCATTCTGTTTACCT 433784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404991389977488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |