Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq12144 131 1e-25 seq189893 98.7 9e-16 >seq12144 Length=38566 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| || |||||||||||| | || || || || || || || Sbjct 227 ATGCAGATCTTTGTAAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 286 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || ||| || || ||||| |||||||| || |||||||| Sbjct 287 GACACCATTGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 346 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||| || ||||||| | ||| | ||||| |||||| Sbjct 347 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 406 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||| | ||| | || |||| || ||||||| || Sbjct 407 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGGTAT 456 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||||||||| | || || ||||| || || || Sbjct 910 CATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 969 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| || || ||| || || ||||| |||||||| || |||||||| Sbjct 970 TGACACCATTGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 1029 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| ||||| || ||||||| || ||| | || |||||||| Sbjct 1030 GCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACCCTCTCAGATTACAA 1089 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||| || ||| | ||| | || |||| || ||||||| || Sbjct 1090 CATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGGTAT 1140 >seq189893 Length=523 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || || | || || || || || ||||| || Sbjct 493 ATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 434 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || || || ||||| || || || ||||| Sbjct 433 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 374 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || ||||||| | ||| | || || |||||| Sbjct 373 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 314 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| ||| | ||| |||| ||| | | |||||||| Sbjct 313 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433509709117052