Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq540 100 3e-16
>seq540
Length=81673
Score = 100 bits (110), Expect = 3e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || |||||||| ||||||||||| || || || || ||||| || ||||||||
Sbjct 26901 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGCCCCAAATCCCCCTCCTCT 26960
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | ||| ||| |||| ||||| || || || || || | ||| ||||| ||||||
Sbjct 26961 CTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCATCCCAAATCTTC 27020
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043
|| ||| || |||||||| ||||
Sbjct 27021 ACACCCTTGGCAGAGAGCTCTTTGG 27045
Score = 100 bits (110), Expect = 3e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361
|||| |||||||| || ||| |||||||| ||||| ||| | || || || || || |
Sbjct 27045 CCAAAGAGCTCTCTGCCAAGGGTGTGAAGATTTGGGATGCTAATGGATCGCGTGAGTTCC 26986
Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421
|||| |||| ||| ||| | | |||||||| || ||||| || || || || ||||
Sbjct 26985 TGGATAAGCAGGGTTTCAGCACCAGAGAGGAGGGGGATTTGGGGCCAGTTTATGGTTTCC 26926
Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446
||||||| |||||||| || || ||
Sbjct 26925 AGTGGAGGCACTTTGGAGCAGAATA 26901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 446769887926080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |