Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq16869 118 9e-22
seq540 87.8 1e-12
>seq16869
Length=240509
Score = 118 bits (130), Expect = 9e-22
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || |||||||||||||| ||||| |||||||| | ||||| || ||||| |||
Sbjct 108067 GTGGTGGAAGAGCTCTTCCGAGACGGGGTTAACTGGGGCAGGATTGTGGCCTTCTTCGAG 108126
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| || || || ||||||||||| |||||||| | | || | ||||||| |||| |
Sbjct 108127 TTCGGCGGCGTGATGTGTGTGGAGAGCGTCAACCGGGAGATGTCTCCCCTCGTGGACAGC 108186
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| ||||| |||||||| ||
Sbjct 108187 ATCGCCGCCTGGATGACCGA 108206
>seq540
Length=81673
Score = 87.8 bits (96), Expect = 1e-12
Identities = 116/161 (72%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
||||| || | || |||||||||||||| | || |||||||| | ||| |||||
Sbjct 23845 AGCCCCGTGACATGGGCAATCATGTATGTAAGCAGTGAATAGCTGGCAATATTGAAAGGC 23904
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| ||||| ||||| ||| | || ||||| || | |||||| || | || || ||| |
Sbjct 23905 ACTCCCAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCACGACAATTCACCATTTAGA 23964
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| ||||| | | || |||||||||| | ||||
Sbjct 23965 ACATAGAACTGGCAAAGAGCATGGCATGGAGGCAAAGCCAT 24005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413131279301296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |