Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq540 95.1 1e-14
seq3407 91.5 1e-13
>seq540
Length=81673
Score = 95.1 bits (104), Expect = 1e-14
Identities = 125/167 (75%), Gaps = 5/167 (3%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075
|| |||||||||||||| || || || || |||| || ||||| || || ||||| |||
Sbjct 26913 AAGTGCCTCCACTGGAAACCATAAACTGGCCCCAAATCCCCCTCCTCTCTGGTGCT-GAA 26971
Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135
||| ||| |||| || || | || || || || ||||| ||||| || ||||| |
Sbjct 26972 ACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCATCCCAAATCTTCACACCCTTGGC 27031
Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG-CAGC 30181
||||||||||||| ||||| || || || || || ||||| ||||
Sbjct 27032 AGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAGACAGC 27076
>seq3407
Length=547508
Score = 91.5 bits (100), Expect = 1e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| |||||||||||||| |||| || | |||||| | | ||| | |||||| || ||
Sbjct 433891 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 433832
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||| || ||| |||||||||||| | ||||| ||||||
Sbjct 433831 ATGGAGAACCAGGTTTTTTTACCCATTATCAGGGCATTCTGTTTACCT 433784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404844667834504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |