Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq6632 109 5e-19
seq16573 107 2e-18
>seq6632
Length=32526
Score = 109 bits (120), Expect = 5e-19
Identities = 104/132 (79%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621
|| || |||| | ||||| || || ||||| |||||||| || | ||| |||||||| ||
Sbjct 9701 ATTCATACCT-CATCTCTACTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCC 9643
Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681
||| || || |||||||| || | ||||| || ||||||||||| || ||||| || ||
Sbjct 9642 TCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGC 9583
Query 4682 GGCAAACGCTAC 4693
||||| |||||
Sbjct 9582 TGCAAAAGCTAC 9571
Score = 89.7 bits (98), Expect = 4e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| ||| || ||||| || || || || |||||||| |||||||||||||| || |||
Sbjct 7590 TCTTTAATGTAGGTGTCAATGAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCA 7531
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
||||| || || || || || | ||| ||||| | ||| |||||
Sbjct 7530 ATCTGGAAGCCATAGAAACACCGAGCCTCTGTGATTTGTACTTC 7487
>seq16573
Length=30794
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || || || || | ||| ||||| | || ||||| ||
Sbjct 23958 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 24017
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
|||||||||||||| ||||| || || |||||||| |||||||| || || ||||| ||
Sbjct 24018 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 24077
Query 4692 AC 4693
||
Sbjct 24078 AC 24079
Score = 100 bits (110), Expect = 2e-16
Identities = 101/130 (78%), Gaps = 1/130 (1%)
Strand=Plus/Plus
Query 4922 AAATCTTTCT-ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
||| |||||| || | |||||| ||||| || || ||||||||||||||||| |||| ||
Sbjct 28933 AAAGCTTTCTCACCAGGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAATGCCAGAA 28992
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||||| || ||||| | ||| || | || || || |||||||| || | || || |
Sbjct 28993 CATGAGAGATGAAGTATTTTTCATCTGCTTTCAGCTTGTTCCAGTGAGGAAGGTCCTTTG 29052
Query 5041 TTAAATCAAC 5050
||| |||||
Sbjct 29053 ATAAGTCAAC 29062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425663264079212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |