Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1540 89.7 4e-13 >seq1540 Length=7905106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| || || | || || || ||| Sbjct 6221458 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGCCCCAAATCCCCCTCCTCT 6221517 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || |||||||| ||||||||||| Sbjct 6221518 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGCGATCCATTAGCATCCCAAAT 6221573 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| || | ||||||||| Sbjct 6221574 CTTCACACCCTTGGCAGAGAGCTCTTTG 6221601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346772795734070