Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1540 136 3e-27 >seq1540 Length=7905106 Score = 136 bits (150), Expect = 3e-27 Identities = 131/168 (78%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||||||||| ||| || ||||| || || ||| || Sbjct 6218576 AGATATTTCTCTGATGGCTTTGCCTCCATGCCATGCTCTTTGCCAGTTCTATGTTCTAAA 6218517 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||||||||| || ||| | ||||| | || | |||||||||||||| || ||||| Sbjct 6218516 TGGTGAATTGTCATGCCAACTCTATCAGAGGTCTGGAGATATGGGACTGGGAGTGCCTTT 6218457 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 ||||||||| |||||| | |||||||| || |||||||| ||||| || Sbjct 6218456 CAATATTGCCAGTTATTCACTGCTTACATACATGATTGCCCATGTCAC 6218409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399171102739195