Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1865 123 4e-23 >seq1865 Length=263943 Score = 123 bits (136), Expect = 4e-23 Identities = 120/152 (79%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||||||||| | ||||||| | |||||||| |||||| || || |||| Sbjct 24813 CCTGCTTCCACCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGTTCTGCGATGT 24872 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||| ||||||||||| || ||||||||| ||||| | ||||| ||||| |||| Sbjct 24873 GGATGTTGAGAGACTGGCTCTGATCGATGAAA-GCGCCTCTGTCTGCTGCCATCTTGAGG 24931 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 || || ||||| || ||||||||||| ||||| Sbjct 24932 ATAGTTTTCTGGGAGATCTCCCACACTGTCTT 24963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795128850544560