Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1865 93.3 8e-14 >seq1865 Length=263943 Score = 93.3 bits (102), Expect = 8e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 || |||| || || | || |||||||||||| || ||||| || || ||||| || Sbjct 32843 CTGGTTGGTTTCAACTCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAAGAAGAGGTC 32902 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 ||||| |||||||| || || |||| ||| | | || | ||||||||| ||||| Sbjct 32903 TCTGGCTCGCTGCTCTTCTTTTCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTC 32962 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| |||||||| |||| ||| | ||| ||||||| || Sbjct 32963 CAAATGCCATGGCTCCAGGTAGATGGCAAAAGCCCCGGGTCTCT 33006 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 |||||||| ||| ||||||||| | || |||||||| || |||||||| ||||||||| Sbjct 31507 ACCTCGTCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTC 31566 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCG 221851 |||| || | ||||| ||| || ||| || ||| ||||| ||||| | || | Sbjct 31567 CCCAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGCGTG 31626 Query 221852 CCAGTCTCCAGCTGAG 221867 || ||||| ||||| Sbjct 31627 CCGGTCTCTGTCTGAG 31642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928814020405440