Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1608 86.0 2e-11 >seq1608 Length=11484289 Score = 86.0 bits (94), Expect = 2e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 289111 GCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACA 289170 ||||| | ||||||| |||| || |||||||||| | ||| | | | |||| ||| Sbjct 4793586 GCTCCTACACCAACAAACATCTCATCAAATTCAGATCCAGATGCATAATAAAATGGAACA 4793527 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 | ||||| || ||||| |||| || ||||| || ||||| || ||||||||||| || Sbjct 4793526 TCAGCTTCACCAGCTACAGCCCGTGCAAGAAGAGTTTTACCAGTACCAGGTGGTCCAACT 4793467 Query 289231 AATAGAA 289237 || |||| Sbjct 4793466 AACAGAA 4793460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471767608335387