Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20harrisi_20[genbank_20GCA_5F002173475.1_202017-06-06] 2,651 sequences; 1,202,994,831 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1540 102 6e-17 >seq1540 Length=7905106 Score = 102 bits (112), Expect = 6e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || |||||||||||||| || || ||||| ||||| || || ||||| Sbjct 6218406 CCCGTGACATGGGCAATCATGTATGTAAGCAGTGAATAACTGGCAATATTGAAAGGCACT 6218465 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || || ||||||||||| || || ||||| || || ||||| | || | | | ||| Sbjct 6218466 CCCAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCATGACAATTCACCATTTAGAACA 6218525 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || ||||| |||| || |||||||| |||||| Sbjct 6218526 TAGAACTGGCAAAGAGCATGGCATGGAGGCAAAGCCATC 6218564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391932936605113