Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq19963 131 2e-25 >seq19963 Length=5210 Score = 131 bits (144), Expect = 2e-25 Identities = 194/275 (71%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||| ||||| Sbjct 4882 GGGCACGCCGTCTGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTCCGGCA 4941 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 ||| || |||||| ||| ||| |||| | ||| || | | || ||| || Sbjct 4942 CACCGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGTGAGGAGGGATCATCGTGCGG 5001 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298 || || |||||| ||||||| |||||| || || || | ||||| ||||| Sbjct 5002 GAAGGGTAGCGCCTCTTTCAGGAAGGTGAAGAGGGGGTGCGCGTTCTTCCCGTTAACCTC 5061 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 |||||||||||| | || ||||| |||| | | || || ||||||||||| |||| ||| Sbjct 5062 GCACTTCTCGAACATGATGAAGTTGGGCTTGTACCCCTTGCCAGGACGGACATGCTCCAG 5121 Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || || |||||| | ||| || ||||||| Sbjct 5122 CGACAACAGGATCTCCTCGTTCGTCGCATTTTCCT 5156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608475811887200