Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq18300 96.9 2e-15 >seq18300 Length=31912 Score = 96.9 bits (106), Expect = 2e-15 Identities = 234/348 (67%), Gaps = 10/348 (3%) Strand=Plus/Plus Query 107700 GAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTT 107759 |||||| | |||||||||||||||| ||| | || || || |||| | ||| Sbjct 20356 GAAGAGGCCGCCTTCCCCATTGCCTACGTCATGACCCTGCACAAGGAGTTTGAGACCTTC 20415 Query 107760 GAACGGCTGCTGCGAGCCGTGT--ATGCCCCTCAGAACATATACTGTGTCCACGTGGATG 107817 || ||||| | | || |||| |||||| |||||| | ||||| ||||||||||||| Sbjct 20416 GAGCGGCTCTTCAGGGCAGTGTACATGCCC--CAGAACGTCTACTGCGTCCACGTGGATG 20473 Query 107818 TGAAGTCCCCAG-AGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAAT 107876 ||| | || | |||| || | |||||| | | | | ||||||||||||| Sbjct 20474 CCAAGGCGCCGGCCCACTTCCATCG-GGCGGTGCGGCGCCTACTGGGCTGCTTCCCCAAT 20532 Query 107877 GTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCT 107936 | |||| | ||| | || | |||||| |||| | | ||| | ||| ||| Sbjct 20533 GCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTATGGCGGCATCTCCCGCCTGCGGGCT 20592 Query 107937 GACCTGAACTGTATGGAAGACTTGCT--CCAGAGCTCAGTGCCATGGAAGTACTTACTGA 107994 ||||| |||| ||| |||| |||| || | | ||||| ||| ||| | || | Sbjct 20593 GACCTCCACTGCATGAGAGACCTGCTGGCCTCGG--CCGTGCCCTGGCGCTACCTGCTCA 20650 Query 107995 ATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCC 108042 | || ||||| |||||||||| | |||||||| ||||| |||| Sbjct 20651 ACACCTGCGGCCAAGACTTCCCCCTCAAGACCAACCGGGAGATCGTCC 20698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348089765893320