Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq25668 91.5 9e-14 seq21656 84.2 1e-11 >seq25668 Length=3966 Score = 91.5 bits (100), Expect = 9e-14 Identities = 163/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| || || | |||| |||||| |||| || || || || || || ||||||||||| Sbjct 416 ACCACCCCTGAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAATCAGA 357 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || | || |||| ||||| ||| ||| || | | |||||||| | ||| Sbjct 356 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGG 297 Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||| || || || | | | ||| || || | | ||| |||||| |||| | Sbjct 296 GATGCCCTCCTTGTCCTGGATCTTGGCC---TTCACATTCTCAATGGTGTCGCTGGGCTC 240 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375 || ||||| || || || || || || || || || ||||| || ||||||||||| Sbjct 239 CACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGTTTAT 183 >seq21656 Length=48212 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | |||| ||| | ||| | || || || || || || ||||| |||||| Sbjct 721 CCACCTCTCAGACGCAGCACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 662 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | || || || |||| ||||| ||| ||| || | | |||||||| | ||| Sbjct 661 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 602 Query 33263 ATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 ||||||||||| || | | | ||| || || | | ||| ||||| |||| | | Sbjct 601 ATGCCTTCTTTGTCCTGGATCTTGGCC---TTCACATTCTCAATGGTGTCACTGGGCTCA 545 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || ||||| || || || || || || || || ||||| || |||||| Sbjct 544 ACCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318613726397640