Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq21656 134 1e-26 >seq21656 Length=48212 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| ||||| ||||||| | || || ||| | | Sbjct 723 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTCTTGAGGTTGAGCCCAGT 782 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| ||||||| ||||||||||| ||||| |||||||| Sbjct 783 GACACCATTGAGAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 842 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || || || ||||| | ||||||| |||||| || || ||||| Sbjct 843 CAGAGGCTGATCTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCCTGTCTGACTACAAC 902 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || ||| | ||||| | || ||||| || Sbjct 903 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTCAGAGGTGG 949 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | || || ||| | | Sbjct 267 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 326 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| ||||||| ||||||||||| ||||| |||||||| Sbjct 327 GACACCATTGAAAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 386 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || || || ||||| | ||||||| |||||| || || ||||| Sbjct 387 CAGAGGCTGATCTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCCTGTCTGACTACAAC 446 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || ||| | ||||| | || ||||| || Sbjct 447 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTCAGAGGTGG 493 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || ||||||| | || || ||| | | Sbjct 495 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 554 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| || ||| ||||||||||| ||||| |||||||| Sbjct 555 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 614 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| ||||| || | ||||||| ||||| || || ||||| Sbjct 615 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 674 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || ||| | ||||| | || ||||| || Sbjct 675 ATCCAGAAGGAATCCACCCTTCATCTCGTGCTGCGTCTGAGAGGTGG 721 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || ||||||| | || || ||| | | Sbjct 951 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 1010 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| || ||| ||||||||||| ||||| |||||||| Sbjct 1011 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 1070 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| ||||| || | || |||| ||| || || ||| ||||| Sbjct 1071 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGTACCCTGTCCGACTACAAC 1130 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || ||| | ||||| Sbjct 1131 ATCCAGAAGGAATCCACCCTCCATCTTGTGCT 1162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433105239616700