Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq25668 100 2e-16 >seq25668 Length=3966 Score = 100 bits (110), Expect = 2e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| |||||||| ||||| || ||| ||||||||| |||||||| || | | Sbjct 1099 CCACCTCTCAGGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1040 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| | || |||| ||||||||| ||||| ||||| | |||||| || || Sbjct 1039 AGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGA 980 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACT---ATCAGTAGATTCG 34077 | || ||| || ||| ||| || ||| | | || || | |||| | | ||| Sbjct 979 ATGCCCTCCTTATCCTGAATCTTGGCCTTCAC---ATTCTCAATGGTATCACTGGGTTCA 923 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || || || || || || ||||||||||| ||||| Sbjct 922 ACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396858282628360