Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq21656 150 2e-31 seq25668 147 2e-30 seq15601 96.9 3e-15 seq4120 84.2 2e-11 >seq21656 Length=48212 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || || || ||||| ||||||||| | || || ||| || Sbjct 264 AACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCC 323 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | ||| | || | |||||||| |||||||| || |||||| | ||| Sbjct 324 AGTGACACCATTGAAAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCCCTGAC 383 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||| |||| || | ||| || |||||||| || || | |||||||| |||||| Sbjct 384 CAGCAGAGGCTGATCTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCCTGTCTGACTAC 443 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| |||||| | || || ||| | ||||||||| | ||||| ||| Sbjct 444 AACATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTCAGAGGTGGC 494 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| |||||||| | || || ||| ||| Sbjct 495 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 554 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| |||||||| || |||||| | ||||| Sbjct 555 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 614 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 615 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 674 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| | || || ||| | ||||||||| ||||||| ||| Sbjct 675 ATCCAGAAGGAATCCACCCTTCATCTCGTGCTGCGTCTGAGAGGTGGC 722 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || |||||||| | || || ||| ||| Sbjct 723 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTCTTGAGGTTGAGCCCAGT 782 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | |||||||| |||||||| || |||||| | ||||| Sbjct 783 GACACCATTGAGAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 842 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | ||| || |||||||| || || | |||||||| ||||||||| Sbjct 843 CAGAGGCTGATCTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCCTGTCTGACTACAAC 902 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| | || || ||| | ||||||||| | ||||| ||| Sbjct 903 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTCAGAGGTGGC 950 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| |||||||| | || || ||| ||| Sbjct 951 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 1010 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| |||||||| || |||||| | ||||| Sbjct 1011 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 1070 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||| |||||||| || | || ||||| |||||||||| Sbjct 1071 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGTACCCTGTCCGACTACAAC 1130 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| | || || ||| | |||||||| |||| || ||| Sbjct 1131 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGGC 1178 >seq25668 Length=3966 Score = 147 bits (162), Expect = 2e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | Sbjct 185 AAACATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGCC 244 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 || ||||| | | | | | || | || |||| ||||| ||||| || ||| | || Sbjct 245 CAGCGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 304 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||| |||| || | || ||||| |||||||| || | ||||||||| || || Sbjct 305 CCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGATTA 364 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| |||||| | || ||||| ||||||||||| Sbjct 365 CAACATCCAGAAGGAATCCACTCTGCACTTGGTGCTGCG 403 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || |||||| | | Sbjct 645 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCGAGT 704 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | || |||| ||||| || || || ||| | ||||| Sbjct 705 GATACTATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 764 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 765 CAGAGGCTGATATTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 824 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| |||||| | || ||||| ||||| |||| Sbjct 825 ATCCAGAAGGAATCCACTCTGCACTTGGTCTTGCG 859 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 873 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAACCCAGT 932 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | || || ||||| ||||| | ||||| Sbjct 933 GATACCATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGCATTCCACCAGACCAG 992 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| |||| || ||||| || ||||| || | ||||||||| ||||||||| Sbjct 993 CAGAGGCTGATTTTTGCTGGCAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACAAC 1052 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| | || || ||| | |||||||| ||||||| ||| Sbjct 1053 ATCCAGAAGGAGTCCACCCTCCATCTTGTGCTGCGCCTGAGAGGTGGC 1100 >seq15601 Length=90986 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGA 133454 ||||||||| | ||||| || || |||||||| || |||||||| ||| ||||| Sbjct 285 CACCTCCTCCGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTG 226 Query 133455 ATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTCCGCTTG 133514 || || ||||| || || || || |||||||||||||| |||| |||||| ||| |||| Sbjct 225 GTACTGGATGGGGAAGATGACGAAGCGGCGGGGGTTTTCCCGCAGCAGCGGTTCCTCTTG 166 Query 133515 G 133515 | Sbjct 165 G 165 >seq4120 Length=36603 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || ||| ||| ||||| ||| |||||||| || ||||| ||||| | || | Sbjct 25232 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGCCCAGGCATCAGGCCCCTCTTCT 25291 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||||||||| || || || ||||||||||||| ||| || || || || || | Sbjct 25292 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 25351 Query 133037 CCACCA 133042 | |||| Sbjct 25352 CAACCA 25357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499909083891200