Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq34653 95.1 5e-14 seq8083 93.3 2e-13 seq13952 91.5 6e-13 seq21656 87.8 7e-12 seq25668 84.2 9e-11 >seq34653 Length=48164 Score = 95.1 bits (104), Expect = 5e-14 Identities = 196/290 (68%), Gaps = 5/290 (2%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || ||||| || || ||||| ||||| || | || || || || || ||||||| Sbjct 47729 ATGCTGTCATTACAGTGCCTGCTTACTTCAACGACTCCCAGCGCCAGGCCACCAAAGATG 47670 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || |||| | || || | || ||||| ||||| ||||||||||||||| Sbjct 47669 CTGGCACCATCACTGGCCTTAACGTGATGCGTATTATCAATGAGCCTACAGCAGCTGCTA 47610 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGA----AACAGAAGaaaaaaaTATTTTAGTATTT 451495 |||| ||||| || ||| || || | | | | || || ||| | | | ||| Sbjct 47609 TAGCCTATGG-CTTGGACAAGAAAGGTACTCGAGCTGGTGAGAAGAATGTGCTCATCTTT 47551 Query 451496 GATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAA 451555 || || || || || ||| ||| || | || | ||||| ||||| | ||||| Sbjct 47550 GACTTGGGAGGGGGTACTTTCGATGTGTCCATCCTCACCATTGAGGATGGAATCTTTGAG 47491 Query 451556 GTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||| | || |||||| |||||||| || || || || |||| || Sbjct 47490 GTGAAGTCCACAGCTGGTGACACTCATCTGGGTGGGGAGGACTTTGACAA 47441 Score = 84.2 bits (92), Expect = 9e-11 Identities = 113/156 (72%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 451982 AAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA 452041 |||||| | || || ||||| ||||| || || ||||||||||| ||||||||||| || Sbjct 47064 AAGAGCATCAACCCCGATGAGGCTGTCGCTTACGGTGCTGCAGTGCAAGCAGCTATCCTC 47005 Query 452042 ACAGGTTCAGATGA---TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTA 452098 | || ||| | ||| || | ||| | ||| | | ||||| || ||||| Sbjct 47004 ATGGG---AGACAAGTCTGAGAATGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCTG 46948 Query 452099 TCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACT 452134 || || || |||| |||||||||||| |||||||| Sbjct 46947 TCCCTGGGCATTGAGACAGCTGGTGGAGTGATGACT 46912 >seq8083 Length=6336 Score = 93.3 bits (102), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTG---AAACTAAAACTTTTGCTCCT 451246 |||| |||||| |||||||||| || | ||||| | || ||||| ||||||||| Sbjct 5760 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGGCAGACAAAAACATTTGCTCCT 5701 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| ||||||| || || || ||||| ||||||||||| Sbjct 5700 GAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGAAACAGCAGA 5654 >seq13952 Length=23644 Score = 91.5 bits (100), Expect = 6e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| ||| | ||||| || || ||||||||||| | || || || || || ||||||| Sbjct 22596 ATGCTGTAGTGACTGTCCCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 22537 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| ||||| || | || || || |||||||| ||||| || ||||| ||||| Sbjct 22536 CTGGAACCATTGCAGGGCTCAACGTCCTGCGAATTATCAATGAGCCAACAGCTGCTGCAA 22477 Query 451440 TAGCATATGGACT 451452 |||| ||||| || Sbjct 22476 TAGCCTATGGTCT 22464 >seq21656 Length=48212 Score = 87.8 bits (96), Expect = 7e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||||||||| || || |||||||| ||||| | | Sbjct 723 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTCTTGAGGTTGAGCCCAGT 782 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || |||||| || || || ||||| ||||| ||||| || Sbjct 783 GACACCATTGAGAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 842 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || ||||| ||||||||||| | || || | || || || Sbjct 843 CAGAGGCTGATCTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCCTGTCTGACTACAAC 902 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 903 ATCCAGAAGGA 913 Score = 84.2 bits (92), Expect = 9e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||||||| || || || || ||||| ||||| | | Sbjct 267 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 326 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | | || |||||| || || || ||||| ||||| ||||| || Sbjct 327 GACACCATTGAAAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 386 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || ||||| ||||||||||| | || || | || || || Sbjct 387 CAGAGGCTGATCTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCCTGTCTGACTACAAC 446 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 447 ATCCAGAAGGA 457 >seq25668 Length=3966 Score = 84.2 bits (92), Expect = 9e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| || || || || || || |||||| | | Sbjct 417 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGAACCCAGT 476 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 ||||||||||| | | || || || || || |||||||| || || ||||| || Sbjct 477 GATAACATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 536 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || ||||| |||||||| | || || | || || ||| Sbjct 537 CAGAGGTTGATCTTTGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACAAT 596 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || || || | || | | |||||||| Sbjct 597 ATCCAGAAGGAATCCACTCTCCATCTTGTGCTGCGCCTGAGAGG 640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974650660035440