Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq34653 304 2e-77 seq13952 203 4e-47 >seq34653 Length=48164 Score = 304 bits (336), Expect = 2e-77 Identities = 1034/1597 (65%), Gaps = 32/1597 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || || || || ||||| ||||| |||||||| || || | Sbjct 46555 TTCATCCTCTGCTTTGTATTTCTCTGCTTCTTGCACCATACGGTCAATGTCATCCTT-GC 46613 Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| | ||||| ||||| || || || ||||| | ||||||| ||| || Sbjct 46614 TAAGGCGACCCTTGTCATTGGTGATGGTGATCTTGTTCTCCTTACCCGTACTCTTGTCCA 46673 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 | ||||| ||||||| |||||||| ||||||| || || | || | || || || Sbjct 46674 CGGCACTGACATTCAGGATACCATTGGCATCAATGTCAAAAGTGACCTCGATCTGGGGGA 46733 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 || | ||||| | || || ||||||| ||||| | || || || |||| ||| Sbjct 46734 CTCCACGGGGTGCTGGGGGGATGCCCGTTAGGTCAAACTTGCCCAGCAAGTTGTTGTCCT 46793 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTTGT 6865 ||| | | | ||||| || || || | | || | | | || || ||| Sbjct 46794 TCGTCATAGCCCTCTCACCCTCGTATACCTGGACCAGAACA-CTGCTCTGGTTGTCTGAG 46852 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || | |||| | || || || | ||||| || || || | | || | | Sbjct 46853 TAGGTGGTGAAGGTCTGAGTTTGTTTGGTGGGAATGGTGGTGTTGCGCTTGATGAGAGCA 46912 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | ||||| || || | || || |||||||| || || ||||| || | | Sbjct 46913 GTCATCACTCCACCAGCTGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGC 46972 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || || || ||| || | || ||| | | ||| || ||||| || | || ||| Sbjct 46973 AGATCCTGCACATTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACTGCAGCACCG 47032 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || ||||| |||||||||||||| || | || || || ||||| || || || | ||| Sbjct 47033 TAAGCGACAGCCTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCC 47092 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || || | || || || ||||| || || || ||||| |||| || || || | Sbjct 47093 TGTAGCAGCTTCTGGATCTTGGGGATACGAGTAGAGCCACCCACCAGCACAATCTCTTGG 47152 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | | || || | ||| | ||| || || | || || || || |||| | | Sbjct 47153 ATCTGGCCCTTGTCTAGCTTGGCGTCACGCAGAGCCTTCTCCACTGGCTCCAGAGTGCCA 47212 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | || | || |||||||| || |||||||||||||| || ||||| ||| Sbjct 47213 CGGAAGAGATCAGCATTGAGCTCCTCAAAGCGGGCACGGGTAATGGAGGTGTAGAAGTCA 47272 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAACGTT 7342 | || ||| | | || ||||| |||||| | | |||| || ||||| | || Sbjct 47273 ATACCCTCGAAGAGGGAGTCAATCTCAATGCTAGCTTGT---GTGGAAGAGCTGAGGGTG 47329 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA 7402 |||||||| | |||||| || || || | || | | || ||| ||| || | ||| Sbjct 47330 CGCTTTGCCCTCTCACAAGCTGTACGCAGCCGCCTCACTGCTCGCTTGTTGCCAGCAATG 47389 Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 || ||| || ||||| || || ||||| || || | | | || || Sbjct 47390 TCACGCTTGTGCTTACGCTTGAATTCTTCCACAAAATGGTTCACCATACGGTTGTCAAAG 47449 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || || ||||||| || || || || || || | || || |||||||| || | ||| Sbjct 47450 TCCTCCCCACCCAGATGAGTGTCACCAGCTGTGGACTTCACCTCAAAGATTCCATCCTCA 47509 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | | || ||||| || ||||| || |||| |||||| ||||| || ||| | Sbjct 47510 ATGGTGAGGATGGACACATCGAAAGTACCCCCTCCCAAGTCAAAGATGAGCACATTCTTC 47569 Query 7583 TCGTCGTCT------TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || ||||| || | || || || ||||| || || || || ||| Sbjct 47570 TCACCAGCTCGAGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTAGGCTCA 47629 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || |||||||| | ||| ||||||| || || | |||||||| || || || || Sbjct 47630 TTGATAATACGCATCACGTTAAGGCCAGTGATGGTGCCAGCATCTTTGGTGGCCTGGCGC 47689 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| ||||| || || || || | ||| || | | ||||| || ||| Sbjct 47690 TGGGAGTCGTTGAAGTAAGCAGGCACTGTAATGACAGCATTCTGCACTTTGCGCCCCAGA 47749 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || || || ||||| ||||| || ||||| || ||||| || | | | Sbjct 47750 TAGGCCTCAGCAATCTCCTTCATCTTGGTTAGGACCATAGAGCTGATCTCCTCTG-GGAA 47808 Query 7817 AACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 | || ||| | ||||| || | || |||| | | |||| || || |||| Sbjct 47809 GAAGGTCTTCATCTCACCCTTGTACTCCACTTGCACCTTGGGCTT----GC--CACCATC 47862 Query 7876 GATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 | ||| | | | ||| | ||||| || || ||| |||| |||| Sbjct 47863 ATTCACCACACGGAAGGGCCAGTGCTTCATGTCAGACTGCACCGTGGGGTCATCGTACTT 47922 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | ||||| |||||||| |||||||| | ||||| |||||||||| || ||||| Sbjct 47923 GCGGCCGATGAGACGCTTGGCATCAAAGATGGTGTTGGTGGGGTTCATAGCCACCTGGTT 47982 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-G 8051 ||| || || || ||||| || || || || || || || || || || | |||| | Sbjct 47983 CTTGGCAGCATCGCCGATGAGGCGCTCTGTA---TCAGTGAAGGCCACATA-GCTGGGCG 48038 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | || || || || |||||||| || || || || || | ||| || |||| || | Sbjct 48039 TGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCGTGCTGGAAGACACCCA 48098 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||| || ||||| || || | || || |||||||| Sbjct 48099 CGCAGGAGTACGTGGTGCCCAGGTCGATGCCGATTGC 48135 >seq13952 Length=23644 Score = 203 bits (224), Expect = 4e-47 Identities = 369/540 (68%), Gaps = 0/540 (0%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 21797 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 21856 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 21857 AAATCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGAGCCACCAACCAGCACGATG 21916 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || |||| ||| | || || || | || || ||||| |||| Sbjct 21917 TCATGGATCTGGGACTTGTCGAGCTTGGCATCCCGCAGGGCCTTCTCCACAGGATCCAGG 21976 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| ||| |||||||| || || | ||| |||||||| ||| Sbjct 21977 GTGCCACGGAACAGGTCAGCGTTCAGCTCCTCAAAGCGAGCTCTGGTGATGGATGTGTAG 22036 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| ||| || || | || |||||||||||| | | |||| | || || | Sbjct 22037 AAGTCAATGCCCTCATAGAGAGAGTCAATTTCAATGCTGGCCTGTGTGCTGGAGGACAGA 22096 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || | ||||||| || ||| ||| | Sbjct 22097 GTACGCTTGGCACGCTCGCAGGCGGTGCGGAGGCGACGAACTGCGCGCTTGTTCTCACTG 22156 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || || || || ||||| | |||||| | | | || Sbjct 22157 ATGTCCTTCTTGTGCTTGCGCTTGAACTCAGCGATGAAGTGGTTCACCATGCGGTTGTCA 22216 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| || || || ||||| | ||| || || |||||||| || Sbjct 22217 AAGTCTTCTCCACCCAAGTGGGTGTCACCGGCGGTGGATTTCACCTCGAAGATACCATCT 22276 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | || |||||||| || ||||| || |||||||| ||||| |||||| Sbjct 22277 TCAATTGTCAGAATGGACACATCAAAGGTGCCACCCCCGAGGTCAAAGATGAGAACGTTC 22336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634797926231200