Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq34224 100 5e-16 >seq34224 Length=26671 Score = 100 bits (110), Expect = 5e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 || ||||||| || || || ||||||||||||||| |||||||||||||||||| ||| Sbjct 11327 GTATACTCCACAATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGG 11268 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||| |||| || || |||||||||||||| || | |||||||| ||| Sbjct 11267 TTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGTGTGCCGGTCTCGGTCTGT 11208 Query 213648 GACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCC 213690 ||| | | || |||||| | | |||||| ||||||| Sbjct 11207 GACTCGATGATAGCATACCAGAGCTGCTGGGCCTTCACCACCC 11165 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 213174 TAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTT 213233 ||||| || ||||||||||| ||||| ||| || | || ||| |||| |||||||| Sbjct 13556 TAGGGTCCTTGCTCCTTGGCAAGCTCACAGCTGGCTTCCAAAGCACCGTAATAGATGGTC 13497 Query 213234 TCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGT 213293 ||||| |||| | ||| | || ||||| || | ||||| | | ||||| | Sbjct 13496 TCAAAGATCTGCTGGTTCAAGCGCTGCGCCTCGGGACTCTCAAAGGGGAACCTCATGAGG 13437 Query 213294 TGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTG 213340 ||| |||| ||||| ||||| ||||| ||||||||||| | ||| Sbjct 13436 ATGAAGGCATCTGCCAGGCCCTGCACCCCAATGCCGATGGGACGGTG 13390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931041649331200