Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq5630 221 1e-52 >seq5630 Length=28411 Score = 221 bits (244), Expect = 1e-52 Identities = 598/909 (66%), Gaps = 7/909 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| ||||| || || || |||||| || ||| || | Sbjct 10868 TGTGTCGCAAATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 10809 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| ||| ||||||| | |||||| ||| || | Sbjct 10808 TATTAGCAAAGAAGTGGTG---GTTTCGTAACATCCAGTTTAGGTCTCCTACCCCAAAAA 10752 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | || || || |||| || ||||| | || ||||| | ||| | Sbjct 10751 CACAGACAGAGCGAACATGAACTCCACTGCATGGTGGGTAGGGTGCACCTTTGGACACAT 10692 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 | ||||| |||| |||||||| ||||||||||| | || | |||||| || || Sbjct 10691 CCCCTTCAAAGTATTGCCACTTAACAAACCTGGCCAGTGCATTCATGTCAGAAACATCAA 10632 Query 160285 ATTTGTACATCAGGGGAA-CGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 |||||| || || ||| | ||||| || || | || || | ||| | || |||||| Sbjct 10631 ATTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAC 10573 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 | || || || |||||||| ||||| || | ||| || ||||||| ||| ||| Sbjct 10572 AAGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAATGAACTTAAGTATTTTGCTG 10513 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | |||| || | |||| | || ||||| || || || || || || Sbjct 10512 CTTTCTAATACGTATTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAA 10453 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | ||| || | |||||| || ||||| | || | Sbjct 10452 ATTGGAGTACTGAGAGGTGGTAGTTGTTTGTCTATGCCCGTGTTCTTTATTTTACCATCA 10393 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | | || | || |||||||| | || | ||||| ||| || || Sbjct 10392 ATAATCTCATGGTGTTTTTTCCACCTTGCTTCTTTATAAACAGGCATTTTTTCTGTTTCC 10333 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || || |||| ||||| | Sbjct 10332 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATT 10273 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| | || || | ||||| | ||| ||||| || | || || || Sbjct 10272 GGAAAGTCCATGCCACAGAGATTTATTAGGTATTTCCAGTTTGAACTTCTTCTGTAGAGA 10213 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| ||||||||||| | |||||| ||||| || || ||| ||||| Sbjct 10212 TCTTTCATGCAGTTAATGTCTGCCTGCACTCTGCTCCATGAAGCATATACAACGCTCTCT 10153 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 || | |||| | |||||| ||||| ||||| || || |||||| ||| | ||| || Sbjct 10152 AGCTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCCTCACAG-CAGCAAA 10094 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | ||||| ||| || || | ||| || | |||||||| || ||||| Sbjct 10093 AAAAGATTCTGGAGACTTTCTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGAT 10034 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | ||| || | || || | |||||| || || |||| | ||| || ||||| ||||| Sbjct 10033 TGACCTTAGAAGTCTGTCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCTAT 9974 Query 160943 CGGAAACTC 160951 ||||| || Sbjct 9973 TGGAAATTC 9965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576914861176800