Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4120 82.4 9e-11 >seq4120 Length=36603 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| || || || |||||||| || || || || ||| ||||| | |||| Sbjct 25354 TTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTT-TGCTGCTATATTTTGG 25296 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| || ||||| || || ||||| |||||||||||| | ||||| Sbjct 25295 CTGAAGAAGAGGGGCCTGATGCCTGGGCTGACTTTCTCCAATGAACTTATTAGCAGAGAT 25236 Query 65206 GAGG 65209 |||| Sbjct 25235 GAGG 25232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596255058678400