Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq25597 105 5e-17 seq13952 104 2e-16 >seq25597 Length=41003 Score = 105 bits (116), Expect = 5e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| ||||| ||| | |||||||| ||||| || |||||| | ||| | | | ||||| Sbjct 27212 TGTTGTAGCTACAGTGGCATTTGGAATGGGCATCAATAAAACAGATATCCGGATGGTTAT 27271 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 ||||||||| || || ||| | || ||| ||||| ||||||||||| ||||| ||||| Sbjct 27272 TCATTACGGTGCCCCTAAGGAAATGGAATCCTATTACCAAGAAATTGGGAGAGCTGGTCG 27331 Query 131296 TGATGG 131301 |||||| Sbjct 27332 TGATGG 27337 >seq13952 Length=23644 Score = 104 bits (114), Expect = 2e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 282693 AAATA--GTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 282750 ||||| |||||||||||||| | |||| |||||| || || ||||| ||||||| Sbjct 23345 AAATACTGTATTGGTTGGATTCATTGCAACTTGATTCTTCGCAGCATCACCAATCAACCT 23404 Query 282751 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 282810 ||||| ||||| || | || || ||| || || || ||||| ||||| || ||||| Sbjct 23405 CTCTGTGTCTGTGAAGGCCACGTAGCTTGGGGTGGTCCGGTTACCCTGATCGTTGGCAAT 23464 Query 282811 AATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 ||||| || || |||| ||| ||||||| ||||| Sbjct 23465 GATTTCCACCTTCCCATGTTGGAATACACCAACACA 23500 Score = 86.0 bits (94), Expect = 5e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| | |||| |||||| || || ||||||||||| | |||||| || |||||||| Sbjct 20771 TTATCCACAGCAGACACATTCAGGATGCCATTGGCATCAATATCAAAAGTTACTTCAATC 20830 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| || ||||| ||||||| ||||| || Sbjct 20831 TGAGGTACACCTCTGGGAGCAGGGGGGATTCC 20862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738559540252680