Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq25668 136 4e-27 seq21656 131 2e-25 seq34224 95.1 1e-14 >seq25668 Length=3966 Score = 136 bits (150), Expect = 4e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || |||||||| || ||| | || || ||||||||||| Sbjct 385 GTGGATTCCTTCTGGATGTTGTAATCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 326 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| ||||||||| || |||||||| |||||||| |||||| ||| Sbjct 325 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 266 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| |||||| |||||||||| || | ||||| ||| ||||| || || || Sbjct 265 ACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 206 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 205 TTCACGAAGATCTGCATG 188 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || ||||| || || ||| | || || ||||||||||| Sbjct 841 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 782 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| ||||||||| || ||||||||||||||||| |||||| ||| Sbjct 781 GCAAATATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 722 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| || || | ||||| || || | ||||| ||| ||||| || || || Sbjct 721 ACATTCTCAATAGTATCACTCGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTC 662 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 661 TTCACGAAGATCTGCAT 645 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| |||||||| || || ||| | || || || ||||| || Sbjct 613 GTGGATTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCTTCCAGTTGCTTACCA 554 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | || ||||||||| || ||||||||||||||||| |||||| ||| Sbjct 553 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 494 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| | || |||| || || || | ||||| ||| ||||| ||||| || Sbjct 493 ACATTCTCAATGTTATCACTGGGTTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 434 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 433 TTCACGAAGATCTGCAT 417 >seq21656 Length=48212 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || ||||| ||| || || ||| | ||||| |||| Sbjct 1154 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTACGACCA-TCCTCCAGCT 1096 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| ||||||||| || || |||||||| ||||| ||||| Sbjct 1095 GCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCT 1036 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| ||||||| || || | |||| ||| ||||| | Sbjct 1035 TGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCAG 976 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || ||||| ||||||||| Sbjct 975 TCAGGGTCTTCACGAAGATCTGCATG 950 Score = 122 bits (134), Expect = 8e-23 Identities = 152/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || ||||| || || ||| | | | || || |||| Sbjct 698 ATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCT 640 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| ||||||||| || || |||||||| ||||| ||||| Sbjct 639 GCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCT 580 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| ||||||| || || | |||| ||| ||||| | Sbjct 579 TGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCAG 520 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || ||||| ||||||||| Sbjct 519 TCAGGGTCTTCACGAAGATCTGCATG 494 >seq34224 Length=26671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 ||||| || || || | ||||| |||||||||||||| ||||| ||||| || ||| Sbjct 11324 TACTCCACAATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTG 11265 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||| |||||||| | ||| ||||| |||||||||||| ||| || || Sbjct 11264 CTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGTGTGCCGGTCTC 11215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483165916383200