Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq25668 100 2e-16 seq21656 98.7 7e-16 >seq25668 Length=3966 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| || | ||| | ||| || ||| ||| || || |||||||| || || Sbjct 1099 CCACCTCTCAGGCGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1040 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||| || || |||||||||| | |||||| ||| | || Sbjct 1039 AGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGA 980 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || || || ||| || |||| ||| ||| ||| || || | ||| || Sbjct 979 ATGCCCTCCTTATCCTGAATCTTGGCCTTCA-CATTCTCAATGGTATCACTGGGTTCAAC 921 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || ||||||||||||||| Sbjct 920 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATA 872 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || | || | |||||| || |||||| || || || ||||||||||| || Sbjct 416 ACCACCCCTGAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAATCAGA 357 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||| || || || ||||| |||| | |||||| || | || Sbjct 356 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGG 297 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || ||| |||| || | ||||||||| | |||| Sbjct 296 GATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTCTCAATGGTGTCGCTGGGCTCCA 238 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || || || ||||||||||| Sbjct 237 CCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 189 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| || | ||| | ||| |||||| || || || || ||||| || || Sbjct 644 ACCACCTCTCAGGCGCAGCACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAGTCAGA 585 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||| ||| || || ||||| ||||| | |||||| || | || Sbjct 584 CAGGGTGCGCCCATCTTCCAGTTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGGGG 525 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || ||| |||| || | | | || || | ||| | Sbjct 524 GATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACATTCTCAATGTTATCACTGGGTTCAA 466 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 465 CTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATA 416 >seq21656 Length=48212 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | ||| | ||| || ||| || || || |||||||| || || Sbjct 721 CCACCTCTCAGACGCAGCACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 662 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| | || |||| || || || ||||| |||| | |||||| || | || Sbjct 661 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 602 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || ||| |||| || | |||||| || | || || Sbjct 601 ATGCCTTCTTTGTCCTGGATCTTGGCCTTC-ACATTCTCAATGGTGTCACTGGGCTCAAC 543 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 542 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 495 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||| | ||| || ||| || || || |||||||| || || Sbjct 949 CCACCTCTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 890 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | ||||| || || || |||| | |||||| || | || Sbjct 889 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGA 830 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| || | |||| || | |||||| || | || || Sbjct 829 ATGCCTTCTTTGTCCTGGATTTT-TGCCTTCACATTCTCAATGGTGTCACTGGGCTCAAC 771 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || ||||| || | || || |||||||||||||| Sbjct 770 CTCAAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 723 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||| | ||| || ||| || || || |||||||| || || Sbjct 493 CCACCTCTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 434 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | ||||| || || || |||| | |||||| || | || Sbjct 433 AGGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGA 374 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| || | |||| || | |||||| || | || || Sbjct 373 ATGCCTTCTTTGTCCTGGATTTT-TGCCTTCACATTTTCAATGGTGTCACTGGGCTCAAC 315 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 |||| ||||| || || || || | || || |||||||||||||| |||| Sbjct 314 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT-GTTG 263 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| || | ||| | ||| || ||| || || || |||||||| ||||| Sbjct 1177 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 1118 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || ||||| |||| | |||||| || | || Sbjct 1117 AGGGTACGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 1058 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || ||| |||| || | |||||| || | || || Sbjct 1057 ATGCCTTCTTTGTCCTGGATCTTGGCCTTC-ACATTCTCAATGGTGTCACTGGGCTCAAC 999 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || || ||||||||||| Sbjct 998 CTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328535023545600