Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq27584 161 1e-33 seq8152 161 1e-33 seq27953 152 7e-31 seq26265 152 7e-31 seq24611 143 4e-28 seq16607 140 5e-27 seq14664 134 2e-25 seq21208 118 2e-20 seq15601 98.7 1e-14 seq34224 96.9 5e-14 seq26942 91.5 2e-12 >seq27584 Length=8432 Score = 161 bits (178), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 376 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 429 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| || |||| |||||| ||| Sbjct 430 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGTATCGCTGGGGAGGCCTCGCGC 489 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | || ||||||||||| |||||||| Sbjct 490 CTGGCGCACTACAACAAGCGCTCCACCATCACTTCTCGGGAGATCCAGACGGCCGTGCGG 549 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| |||||| |||||||||||||||| Sbjct 550 CTCCTGCTGCCGGGTGAGCTGGCCAAGCACGCAGTCTCCGAGGGCACCA 598 >seq8152 Length=12887 Score = 161 bits (178), Expect = 1e-33 Identities = 175/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || ||| |||| || |||| ||||| Sbjct 12528 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC---TGG--CATC-TCGTCCAAGGCCATG 12475 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| || |||| |||||| ||| Sbjct 12474 GGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGTATCGCTGGGGAGGCCTCGCGC 12415 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | || ||||||||||| || ||||| Sbjct 12414 CTGGCGCACTACAACAAGCGCTCCACCATCACTTCTCGGGAGATCCAGACGGCTGTGCGG 12355 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| |||||| |||||||||||||||| Sbjct 12354 CTCCTGCTGCCGGGTGAGCTGGCCAAGCACGCGGTCTCCGAGGGCACCA 12306 >seq27953 Length=1217 Score = 152 bits (168), Expect = 7e-31 Identities = 172/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||||||||||||| || || |||| || |||| ||||| Sbjct 577 TACAAGGTCCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 524 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| |||| || |||| |||||| ||| Sbjct 523 AGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGTATCGCTGGGGAGGCCTCGCGC 464 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | || ||||||||||| |||||||| Sbjct 463 CTGGCGCACTACAACAAGCGCTCCACCATCACTTCTCGGGAGATCCAGACGGCCGTGCGG 404 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| |||||| |||||||||||||||| Sbjct 403 CTCCTGCTGCCGGGTGAGCTGGCCAAGCACGCGGTCTCCGAGGGCACCA 355 >seq26265 Length=1658 Score = 152 bits (168), Expect = 7e-31 Identities = 172/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| | ||| Sbjct 437 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCTATG 490 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| || |||| |||||| ||| Sbjct 491 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGTATCGCTGGGGAGGCCTCGCGC 550 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | || ||||||||||| |||||||| Sbjct 551 CTGGCGCACTACAACAAGCGCTCCACCATCACTTCTCGGGAGATCCAGACGGCCGTGCGG 610 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| |||||| || ||||||||||||| Sbjct 611 CTCCTGCTGCCGGGTGAGCTGGCCAAGCACGCAGTTTCCGAGGGCACCA 659 >seq24611 Length=9798 Score = 143 bits (158), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || | |||| || |||| | ||| Sbjct 4347 TACAAGGTGCTGAAGCAGGTGCACCCCGACACAGG-----CATC-TCGTCCAAGGCTATG 4294 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| || |||| |||||| ||| Sbjct 4293 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGTATCGCTGGGGAGGCCTCGCGC 4234 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| | | || ||||||||||| |||||||| Sbjct 4233 CTGGCGCACTACAACAAGCGCTCCACCTCCCCTTCTCGGGAGATCCAGACGGCCGTGCGG 4174 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| |||||| |||||||||||||||| Sbjct 4173 CTCCTGCTGCCGGGTGAGCTGGCCAAGCACGCGGTCTCCGAGGGCACCA 4125 >seq16607 Length=28110 Score = 140 bits (154), Expect = 5e-27 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| || ||| |||| ||| |||| | ||| Sbjct 13134 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC---TGG--CATC-TCCTCCAAGGCGATG 13187 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || || ||||| |||| ||||||| || || ||| Sbjct 13188 GGCATCATGAACTCCTTCGTTAATGACATCTTCGAGCGCATCGCTGGAGAAGCGTCCCGC 13247 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | |||||||||||||| || |||||| Sbjct 13248 CTGGCCCATTACAACAAGCGCTCCACCATCACCTCCCGCGAGATCCAGACGGCAGTGCGC 13307 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | || || ||||||| |||||| ||||| |||||||||| Sbjct 13308 CTGCTGCTCCCAGGAGAGCTGGCCAAGCACGCTGTCTCGGAGGGCACCA 13356 >seq14664 Length=2177 Score = 134 bits (148), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| |||||||| || || |||| | |||||||| | | | Sbjct 1227 TCTACAAGGTGCTGAAGCAGGTTCATCCGGACACCGGTATT---TCCTCCAA---GGCAA 1280 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||||||||| |||| ||||||| | || || | Sbjct 1281 TGGGCATCATGAACTCTTTCGTCAACGACATCTTCGAGCGCATCGCCGGGGAAGCGTCGC 1340 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||||| || ||||||||| || ||| |||| ||||||||||| || ||| Sbjct 1341 GCCTGGCGCACTATAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCTGTGA 1400 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || | ||| |||||| |||||| |||||||| ||||||||||||| Sbjct 1401 GGCTCCTGCTGCCCGGCGAGTTGGCCAAACACGCCGTGTCCGAGGGCACCA 1451 >seq21208 Length=6613 Score = 118 bits (130), Expect = 2e-20 Identities = 136/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| | ||| Sbjct 5652 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCTATG 5705 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| || |||| |||||| ||| Sbjct 5706 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGTATCGCTGGGGAGGCCTCGCGC 5765 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | || ||||||||||| |||||||| Sbjct 5766 CTGGCGCACTACAACAAGCGCTCCACCATCACTTCCCGGGAGATCCAGACGGCCGTGCGG 5825 Query 725094 CT 725095 || Sbjct 5826 CT 5827 >seq15601 Length=90986 Score = 98.7 bits (108), Expect = 1e-14 Identities = 91/114 (80%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || ||||||||||| || ||||| |||||| ||| | |||||||||| ||||| Sbjct 172 GAACCGCTGCTGCGGGAAAACCCCCGCCGCTTCGTCATCTTCCCCATCCAGTACCACGAC 231 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | ||||| ||| ||||||||||||||||| ||||| || |||||||| Sbjct 232 ATCTGGCAGATGTA-CAAGAAGGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGT 284 >seq34224 Length=26671 Score = 96.9 bits (106), Expect = 5e-14 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| |||||| || || ||| | | || | |||||||||||| || |||||| ||||| Sbjct 11182 CAGCTCTGGTATGCTATCATCGAGTCACAGACCGAGACCGGCACACCGTACATGCTCTAC 11241 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGC--CA 262208 || ||| || |||| || ||||||||||||||||||||||||| || | || || Sbjct 11242 AAAGACTCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCA--TCAAATGCAGCA 11299 Query 262209 ACCTGTGCACCGAGATCGT 262227 ||||||| || || || || Sbjct 11300 ACCTGTGTACAGAAATTGT 11318 >seq26942 Length=15121 Score = 91.5 bits (100), Expect = 2e-12 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| ||||| ||||||||||| |||||||| || | |||| || | | | | ||| Sbjct 13337 AAGGCCATGAGCATCATGAACTCCTTTGTCAATGATCTCTTCGAGCGTCTGGCCTCGGAG 13396 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 ||| |||||||| | | |||| | ||| ||| ||| || || ||| | ||||| Sbjct 13397 GCCTCGCGCCTGGCCCAGTACAACCATCGCTCCACCATCACCAGCCGGGAGGTGCAGACA 13456 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||||| || | ||| || || ||||||| ||| || ||||| |||||||||| Sbjct 13457 GCTGTGCGGCTCCTGCTGCCTGGTGAGCTGGCCAAGCATGCTGTCTCTGAGGGCACCA 13514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7173742861473160