Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq22582 102 6e-17 >seq22582 Length=17029 Score = 102 bits (112), Expect = 6e-17 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || |||||||| || ||||| || || || ||||| || || ||||| Sbjct 11312 CCTGTGACATGGGCAATCATATAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 11371 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTA-TTTTGTGACAC 111896 ||||| ||||||||||| || || ||||| || || ||||| | || | ||| || || Sbjct 11372 CCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCATGACAATTCACCATTGAGA-AC 11430 Query 111897 ATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||| || || ||||| |||| || |||||||| |||||| Sbjct 11431 ATAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCATC 11470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391744113015340