Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq18300 145 1e-29 >seq18300 Length=31912 Score = 145 bits (160), Expect = 1e-29 Identities = 263/378 (70%), Gaps = 14/378 (4%) Strand=Plus/Plus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATG 13739 ||||||| || || ||||| |||||| || ||| || |||||| | |||| Sbjct 20356 GAAGAGGCCGCCTTCCCCATTGCCTACG---TCATGACCCTGCACAAGGAGTTTGAGACC 20412 Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799 |||||||| ||| | ||||| | ||| || |||||| ||||||||||||||||||| Sbjct 20413 TTCGAGCGGCTCTTCAGGGCAGTGTACATGCCCCAGAACGTCTACTGCGTCCACGTGGAT 20472 Query 13800 TCCAAGTC--CGGCGACGAGTTC-ATCCGGGGCGTCTCGGCCATCGCCAGG-TGCTTCCC 13855 ||||| | |||| | | ||| ||| ||||| |||| | || |||||||| Sbjct 20473 GCCAAGGCGCCGGC--CCACTTCCATC--GGGCGGTGCGGCGCCTACTGGGCTGCTTCCC 20528 Query 13856 TAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCA 13915 || | ||| ||| |||| | | ||||| || ||| | ||| ||| Sbjct 20529 CAATGCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTATGGCGGCATCTCCCGCCTGCG 20588 Query 13916 GGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCT 13975 ||| |||||| ||||||| |||||| ||||| |||| ||| | |||||||| Sbjct 20589 GGCTGACCTCCACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCT 20648 Query 13976 CAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAA 14035 |||| ||||| |||||||| ||||||||||||| ||||||||| ||| |||||| Sbjct 20649 CAACACCTGCGGCCAAGACTTCCCCCTCAAGACCAACCGGGAGATCGTCCGGCTGCTGAA 20708 Query 14036 GGCCCTGGGCGGCAAGAA 14053 || ||| | |||||||| Sbjct 20709 GGGCCTCAGGGGCAAGAA 20726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658391879756800