Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nestor_20notabilis_20[refseq_20GCF_5F000696875.1_202014-06-05] 42,180 sequences; 1,053,559,886 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq25668 109 3e-19 seq21656 109 3e-19 >seq25668 Length=3966 Score = 109 bits (120), Expect = 3e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || |||| |||||| || |||||| ||||| || ||||| ||||| || Sbjct 415 CCACCCCTGAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAATCAGAC 356 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| | ||||| || || || || ||||| || | | ||| ||||| || || Sbjct 355 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 296 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | ||| ||||| | |||||| Sbjct 295 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCCAC 237 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 |||| ||| || || || || || | || ||||| || ||||||||||| || Sbjct 236 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGTTTAT 183 >seq21656 Length=48212 Score = 109 bits (120), Expect = 3e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| ||||||| ||| | |||||| ||| ||||| || ||||| || || || Sbjct 494 GCCACCTCTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 435 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | |||||||| |||||||| || || || | | ||| ||||| || || Sbjct 434 CAGGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGCTGGTCAGGGGG 375 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657 | || || ||||| ||| ||||| || || | ||| ||||| | ||| | Sbjct 374 AATGCCTTCTTTGTCCTGGAT-TTTTGCCTTCACATTTTCAATGGTGTCACTGGGCTCAA 316 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 | || | ||| || || || || || | || |||||||| ||||||||||||| Sbjct 315 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTGA 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314567807347940